Ghent University Academic Bibliography

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Your filters: cql: author="Apweiler, Rolf" or (type exact bookEditor and editor="Apweiler, Rolf")

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Data sharing under the General Data Protection Regulation : time to harmonize law and research ethics?

Antonia Vlahou, Dara Hallinan, Rolf Apweiler, Angel Argiles, Joachim Beige, Ariela Benigni, Rainer Bischoff, Peter C. Black, Franziska Boehm, Jocelyn Ceraline, et al.

(2021) HYPERTENSION. 77(4). p.1029-1035
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ProteomeXchange provides globally coordinated proteomics data submission and dissemination

Juan A Vizcaino, Eric W Deutsch, Rui Wang, Attila Csordas, Florian Reisinger, Daniel Ríos, José A Dianes, Zhi Sun, Terry Farrah, Nuno Bandeira, et al.

(2014) NATURE BIOTECHNOLOGY. 32(3). p.223-226
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The HUPO initiative on Model Organism Proteomes, iMOP

Alexandre ME Jones, Ruedi Aebersold, Christian H Ahrens, Rolf Apweiler, Katja Baerenfaller, Mark Baker, Emøke Bendixen, Steve Briggs, Philip Brownridge, Erich Brunner, et al.

(2012) PROTEOMICS. 12(3). p.340-345
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A posteriori quality control for the curation and reuse of public proteomics data

Joseph M Foster, Sven Degroeve (UGent) , Laurent Gatto, Matthieu Visser, Rui Wang, Johannes Griss, Rolf Apweiler and Lennart Martens (UGent)

(2011) PROTEOMICS. 11(11). p.2182-2194
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'4D Biology for health and disease' workshop report

Jan-Pieter Abrahams, Rolf Apweiler, Rudi Balling, Michela G Bertero, Janusz M Bujnicki, Naomi E Chayen, Patrick Chène, Gary L Corthals, Tomasz Dyląg, Friedrich Förster, et al.

(2011) NEW BIOTECHNOLOGY. 28(4). p.291-293
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Proteomics data collection: 5th ProDaC workshop: 4 March 2009, Kolympari, Crete, Greece

Martin Eisenacher, Lennart Martens (UGent) , Harald Barsnes, Tanja Hardt, Michael Kohl, Jari Häkkinen, Rolf Apweiler, Helmut E Meyer and Christian Stephan

(2009) PROTEOMICS. 9(14). p.3626-3629
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- Miscellaneous
Proteomics data collection : 4th ProDaC workshop: 15 August 2008, Amsterdam, The Netherlands

Martin Eisenacher, Michael Kohl, Lennart Martens (UGent) , Harald Barsnes, Tanja Hardt, Fredrik Levander, Jari Häkkinen, Rolf Apweiler, Helmut E Meyer and Christian Stephan

(2009) PROTEOMICS. 9(2). p.218-222
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Getting a grip on proteomics data: Proteomics Data Collection (ProDaC)

Martin Eisenacher, Lennart Martens (UGent) , Michael Kohl, Harald Barsnes, Kenny Helsens (UGent) , Jari Häkkinen, Fredrik Levander, Ruedi Aebersold, Joël Vandekerckhove (UGent) , Michael J. Dunn, et al.

(2009) PROTEOMICS. 9(15). p.3928-3933
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Approaching clinical proteomics: current state and future fields of application in fluid proteomics

Rolf Apweiler, Charalampos Aslanidis, Thomas Deufel, Andreas Gerstner, Jens Hansen, Dennis Hochstrasser, Roland Kellner, Markus Kubicek, Friedrich Lottspeich, Edmund Maser, et al.

(2009) CLINICAL CHEMISTRY AND LABORATORY MEDICINE. 47(6). p.724-744
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The Ontology Lookup Service : more data and better tools for controlled vocabulary queries

Richard G Côté, Philip Jones, Lennart Martens (UGent) , Rolf Apweiler and Henning Hermjakob

(2008) NUCLEIC ACIDS RESEARCH. 36(suppl. 2). p.W372-W376
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Proteomics data collection: 3rd ProDaC workshop April 22nd 2008, Toledo, Spain

Martin Eisenacher, Tanja Hardt, Lennart Martens (UGent) , Jari Häkkinen, Rolf Apweiler, Michael Hamacher, Helmut E Meyer and Christian Stephan

(2008) PROTEOMICS. 8(20). p.4163-4167
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Analysis of the experimental detection of central nervous system-related genes in human brain and cerebrospinal fluid datasets

Michael Mueller, Juan Antonio Vizcaíno, Philip Jones, Richard Côté, David Thorneycroft, Rolf Apweiler, Henning Hermjakob and Lennart Martens (UGent)

(2008) PROTEOMICS. 8(6). p.1138-1148
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Analyzing large-scale proteomics projects with latent semantic indexing

Sebastian Klie, Lennart Martens (UGent) , Juan Antonio Vizcaíno, Richard Côté, Phil Jones, Rolf Apweiler, Alexander Hinneburg and Henning Hermjakob

(2008) JOURNAL OF PROTEOME RESEARCH. 7(1). p.182-191
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Proteomics data collection : 2nd ProDaC workshop : 5 October 2007, Seoul, Korea

Martin Eisenacher, Tanja Hardt, Michael Hamacher, Lennart Martens (UGent) , Jari Häkkinen, Fredrik Levander, Rolf Apweiler, Helmut E Meyer and Christian Stephan

(2008) PROTEOMICS. 8(7). p.1326-1330
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Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project

Chris F Taylor, Dawn Field, Susanna-Assunta Sansone, Jan Aerts, Rolf Apweiler, Michael Ashburner, Catherine A Ball, Pierre-Alain Binz, Molly Bogue, Tim Booth, et al.

(2008) NATURE BIOTECHNOLOGY. 26(8). p.889-896
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Annotating the human proteome: beyond establishing a parts list

Michael Mueller, Lennart Martens (UGent) and Rolf Apweiler

(2007) BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS. 1774(2). p.175-191
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Human Proteome Organization Proteomics Standards Initiative: data standardization, a view on developments and policy

Lennart Martens (UGent) , Sandra Orchard, Rolf Apweiler and Henning Hermjakob

(2007) MOLECULAR & CELLULAR PROTEOMICS. 6(9). p.1666-1667
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The Protein Identifier Cross-Referencing (PICR) service : reconciling protein identifiers across multiple source databases

Richard G Côté, Philip Jones, Lennart Martens (UGent) , Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler and Henning Hermjakob

(2007) BMC BIOINFORMATICS. 8.
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Proteomics data collection : the 1st ProDaC workshop: 26 April 2007, Ecole Normale Supérieur, Lyon, France

Martin Eisenacher, Tanja Hardt, Michael Hamacher, Lennart Martens (UGent) , Jari Häkkinen, Fredrik Levander, Rolf Apweiler, Helmut E Meyer and Christian Stephan

(2007) PROTEOMICS. 7(17). p.3034-3037
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- Miscellaneous
High performance proteomics : 7th HUPO Brain Proteome project workshop, March 7-9, 2007, Wellcome Trust Conference Centre, Hinxton, UK

Michael Hamacher, Christian Stephan, Martin Eisenacher, Piotr Lewczuk, Jens Wiltfang, Lennart Martens (UGent) , Juan Antonio Vizcaíno, Kyung-Hoon Kwon, Jong Shin Yoo, Young Mok Park, et al.

(2007) PROTEOMICS. 7(15). p.2490-2496
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The minimum information about a proteomics experiment (MIAPE)

Chris F Taylor, Norman W Paton, Kathryn S Lilley, Pierre-Alain Binz, Randall K, Jr Julian, Andrew R Jones, Weimin Zhu, Rolf Apweiler, Ruedi Aebersold, Eric W Deutsch, et al.

(2007) NATURE BIOTECHNOLOGY. 25(8). p.887-893
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PRIDE : a public repository of protein and peptide identifications for the proteomics community

Philip Jones, Richard G Côté, Lennart Martens (UGent) , Antony F Quinn, Chris F Taylor, William Derache, Henning Hermjakob and Rolf Apweiler

(2006) NUCLEIC ACIDS RESEARCH. 34(suppl. 1). p.D659-D663
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A comparison of the HUPO Brain Proteome project pilot with other proteomics studies

Lennart Martens (UGent) , Michael Müller, Christian Stephan, Michael Hamacher, Kai A Reidegeld, Helmut E Meyer, Martin Blüggel, Joël Vandekerckhove (UGent) , Kris Gevaert (UGent) and Rolf Apweiler

(2006) PROTEOMICS. 6(18). p.5076-5086
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Functional annotation of proteins identified in human brain during the HUPO Brain Proteome project pilot study

Michael Mueller, Lennart Martens (UGent) , Kai A Reidegeld, Michael Hamacher, Christian Stephan, Martin Blüggel, Gerhard Körting, Daniel Chamrad, Christian Scheer, Katrin Marcus, et al.

(2006) PROTEOMICS. 6(18). p.5059-8075
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The power of cooperative investigation: summary and comparison of the HUPO Brain Proteome project pilot study results

Kai A Reidegeld, Michael Müller, Christian Stephan, Martin Blüggel, Michael Hamacher, Lennart Martens (UGent) , Gerhard Körting, Daniel C Chamrad, David Parkinson, Rolf Apweiler, et al.

(2006) PROTEOMICS. 6(18). p.4997-5014
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- Journal Article
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The HUPO Brain Proteome Project

Kai Reidegeld, Hemut Meyer, Christian Stephan, Martin Blüggel, Gerhard Körting, Daniel Chamrad, Christian Scheer, Herbert Thiele, Bruker Daltonik, Chris Taylor, et al.

(2006) EUROPEAN PHARMACEUTICAL REVIEW.
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The HUPO Brain Proteome project jamboree: centralised summary of the pilot studies

Michael Hamacher, Christian Stephan, Martin Blüggel, Daniel Chamrad, Gerhard Körting, Lennart Martens (UGent) , Michael Müller, Henning Hermjakob, David Parkinson, Andrew Dowsey, et al.

(2006) PROTEOMICS. 6(6). p.1719-1721
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Automated reprocessing pipeline for searching heterogeneous mass spectrometric data of the HUPO Brain Proteome project pilot phase

Christian Stephan, Kai A Reidegeld, Michael Hamacher, André van Hall, Katrin Marcus, Chris Taylor, Philip Jones, Michael Müller, Rolf Apweiler, Lennart Martens (UGent) , et al.

(2006) PROTEOMICS. 6(18). p.5015-5029
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- Miscellaneous
HUPO Brain Proteome Project : summary of the pilot phase and introduction of a comprehensive data reprocessing strategy

Michael Hamacher, Rolf Apweiler, Georg Arnold, Albert Becker, Martin Blüggel, Odile Carrette, Christine Colvis, Michael J. Dunn, Thomas Fröhlich, Michael Fountoulakis, et al.

(2006) PROTEOMICS. 6(20). p.5674-5674
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- Miscellaneous
HUPO Brain Proteome Project : summary of the pilot phase and introduction of a comprehensive data reprocessing strategy

Michael Hamacher, Rolf Apweiler, Georg Arnold, Albert Becker, Martin Blüggel, Odile Carrette, Christine Colvis, Michael J Dunn, Thomas Fröhlich, Michael Fountoulakis, et al.

(2006) PROTEOMICS. 6(18). p.4890-4898
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PRIDE: the proteomics identifications database

Lennart Martens (UGent) , Henning Hermjakob, Philip Jones, Marcin Adamski, Chris Taylor, David States, Kris Gevaert (UGent) , Joël Vandekerckhove (UGent) and Rolf Apweiler

(2005) PROTEOMICS. 5(13). p.3537-3545
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5th HUPO BPP bioinformatics meeting at the European Bioinformatics Institute in Hinxton, UK : setting the analysis frame

Christian Stephan, Michael Hamacher, Martin Blüggel, Gerhard Körting, Daniel Chamrad, Christian Scheer, Katrin Marcus, Kai A Reidegeld, Christiane Lohaus, Heike Schäfer, et al.

(2005) PROTEOMICS. 5(14). p.3560-3562

Academic Bibliography

Data sharing under the General Data Protection Regulation : time to harmonize law and research ethics?

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

The HUPO initiative on Model Organism Proteomes, iMOP

A posteriori quality control for the curation and reuse of public proteomics data

'4D Biology for health and disease' workshop report

Proteomics data collection: 5th ProDaC workshop: 4 March 2009, Kolympari, Crete, Greece

Proteomics data collection : 4th ProDaC workshop: 15 August 2008, Amsterdam, The Netherlands

Getting a grip on proteomics data: Proteomics Data Collection (ProDaC)

Approaching clinical proteomics: current state and future fields of application in fluid proteomics

The Ontology Lookup Service : more data and better tools for controlled vocabulary queries

Proteomics data collection: 3rd ProDaC workshop April 22nd 2008, Toledo, Spain

Analysis of the experimental detection of central nervous system-related genes in human brain and cerebrospinal fluid datasets

Analyzing large-scale proteomics projects with latent semantic indexing

Proteomics data collection : 2nd ProDaC workshop : 5 October 2007, Seoul, Korea

Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project

Annotating the human proteome: beyond establishing a parts list

Human Proteome Organization Proteomics Standards Initiative: data standardization, a view on developments and policy

The Protein Identifier Cross-Referencing (PICR) service : reconciling protein identifiers across multiple source databases

Proteomics data collection : the 1st ProDaC workshop: 26 April 2007, Ecole Normale Supérieur, Lyon, France

High performance proteomics : 7th HUPO Brain Proteome project workshop, March 7-9, 2007, Wellcome Trust Conference Centre, Hinxton, UK

The minimum information about a proteomics experiment (MIAPE)

PRIDE : a public repository of protein and peptide identifications for the proteomics community

A comparison of the HUPO Brain Proteome project pilot with other proteomics studies

Functional annotation of proteins identified in human brain during the HUPO Brain Proteome project pilot study

The power of cooperative investigation: summary and comparison of the HUPO Brain Proteome project pilot study results

The HUPO Brain Proteome Project

The HUPO Brain Proteome project jamboree: centralised summary of the pilot studies

Automated reprocessing pipeline for searching heterogeneous mass spectrometric data of the HUPO Brain Proteome project pilot phase

HUPO Brain Proteome Project : summary of the pilot phase and introduction of a comprehensive data reprocessing strategy

HUPO Brain Proteome Project : summary of the pilot phase and introduction of a comprehensive data reprocessing strategy

PRIDE: the proteomics identifications database

5th HUPO BPP bioinformatics meeting at the European Bioinformatics Institute in Hinxton, UK : setting the analysis frame

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