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- 2024
- The role of Helicobacter suis, Fusobacterium gastrosuis, and the pars oesophageal microbiota in gastric ulceration in slaughter pigs receiving meal or pelleted feed (2024) VETERINARY RESEARCH. 55(1).
- Osteopontin characterizes bile duct-associated macrophages and correlates with liver fibrosis severity in primary sclerosing cholangitis (2024) HEPATOLOGY. 79(2). p.269-288
- 2023
- HIV-PULSE : a long-read sequencing assay for high-throughput near full-length HIV-1 proviral genome characterization (2023) NUCLEIC ACIDS RESEARCH. 51(20). p.e102-e102
- New insights into the combined toxicity of aflatoxin B1 and fumonisin B1 in HepG2 cells using Seahorse respirometry analysis and RNA transcriptome sequencing (2023) ENVIRONMENT INTERNATIONAL. 175.
- Targeted haplotyping in pharmacogenomics using Oxford Nanopore Technologies' adaptive sampling (2023) FRONTIERS IN PHARMACOLOGY. 14.
- Identification and profiling of a novel Bombyx mori latent virus variant acutely infecting Helicoverpa armigera and Trichoplusia ni (2023) VIRUSES-BASEL. 15(5).
- How do engineered Yarrowia lipolytica strains secrete free fatty acids : hints from comparative transcriptomics (2023) FEMS YEAST RESEARCH. 23.
- Severe udder cleft dermatitis lesion transcriptomics points to an impaired skin barrier, defective wound repair and a dysregulated inflammatory response as key elements in the pathogenesis (2023) PLOS ONE. 18(7).
- Guar gum as galactomannan source induces dysbiosis and reduces performance in broiler chickens and dietary β-mannanase restores the gut homeostasis (2023) POULTRY SCIENCE. 102(8).
- Post-feeding transcriptomics reveals essential genes expressed in the midgut of the desert locust (2023) FRONTIERS IN PHYSIOLOGY. 14.
- Myeloid OTULIN deficiency couples RIPK3-dependent cell death to Nlrp3 inflammasome activation and IL-1β secretion (2023) SCIENCE IMMUNOLOGY. 8(89).
- Identification of a novel idiopathic epilepsy risk locus and a variant in the CCDC85A gene in the Dutch partridge dog (2023) ANIMALS. 13(5).
- Transcriptomics reveal molecular differences in equine oocytes vitrified before and after in vitro maturation (2023) INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 24(8).
- Comparative transcriptomics of porcine liver-resident CD8αdim, liver CD8αhigh and circulating blood CD8αhigh NK cells reveals an intermediate phenotype of liver CD8αhigh NK cells (2023) FRONTIERS IN IMMUNOLOGY. 14.
- Molecular analysis of broad-spectrum induced resistance in rice by the green leaf volatile Z-3-hexenyl acetate (2023) JOURNAL OF EXPERIMENTAL BOTANY. 74(21). p.6804-6819
- Systematic comparison of experimental and human obstructive cholestasis reveals conservation of canonical pathway activation and biomarkers relevant for cholestatic liver disease (2023) GENES & DISEASES. 10(1). p.18-21
- Dynamics of training and acute exercise-induced shifts in muscular glucose transporter (GLUT) 4, 8, and 12 expression in locomotion versus posture muscles in healthy horses (2023) FRONTIERS IN PHYSIOLOGY. 14.
- A tapt1 knock-out zebrafish line with aberrant lens development and impaired vision models human early-onset cataract (2023) HUMAN GENETICS. 142(3). p.457-476
- Cathepsin-L secreted by high-quality bovine embryos exerts an embryotrophic effect in vitro (2023) INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 24(7).
- The multi-omics single-cell landscape of sinus mucosa in uncontrolled severe chronic rhinosinusitis with nasal polyps (2023) CLINICAL IMMUNOLOGY. 256.
- Intrathymic dendritic cell-biased precursors promote human T cell lineage specification through IRF8-driven transmembrane TNF (2023) NATURE IMMUNOLOGY. 24(3). p.474-486
- Single-cell profiling identifies a novel human polyclonal unconventional T cell lineage (2023) JOURNAL OF EXPERIMENTAL MEDICINE. 220(6).
- RIPK1 kinase-dependent inflammation and cell death contribute to the pathogenesis of COPD (2023) EUROPEAN RESPIRATORY JOURNAL. 61(4).
- 2022
- Haplotyping pharmacogenes using TLA combined with Illumina or Nanopore sequencing (2022) SCIENTIFIC REPORTS. 12(1).
- Technical considerations in PCR-based assay design for diagnostic DNA methylation cancer biomarkers (2022) CLINICAL EPIGENETICS. 14(1).
- Nanopore sequencing of a forensic combined STR and SNP multiplex (2022) FORENSIC SCIENCE INTERNATIONAL-GENETICS. 56.
- Cas9 targeted nanopore sequencing with enhanced variant calling improves CYP2D6-CYP2D7 hybrid allele genotyping (2022) PLOS GENETICS. 18(9).
- Signatures of polygenic adaptation align with genome-wide methylation patterns in wild strawberry plants (2022) NEW PHYTOLOGIST. 235(4). p.1501-1514
- Multigenerational DNA methylation responses to copper exposure in daphnia : potential targets for epigenetic biomarkers? (2022) CHEMOSPHERE. 308(part 1).
- QueSTR probes : Quencher-labeled RNase H2-dependent probes for short tandem repeat genotyping (2022) SENSORS AND ACTUATORS B-CHEMICAL. 361.
- Continuous activation of the IL-17F driven inflammatory pathway in acute and chronic digital dermatitis lesions in dairy cattle (2022) SCIENTIFIC REPORTS. 12(1).
- Enrichment of circulating trophoblasts from maternal blood using filtration-based Metacell (R) technology (2022) PLOS ONE. 17(7).
- Veterinarians’ competence in applying basic genetic principles and daily implementation of clinical genetics : a study in a university environment (2022) JOURNAL OF VETERINARY MEDICAL EDUCATION. 49(6). p.799-806
- Metabolism and health effects of rare sugars in a CACO-2/HepG2 coculture model (2022) NUTRIENTS. 14(3).
- Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction (2022) BMC PLANT BIOLOGY. 22(1).
- PIWI proteins play an antiviral role in Lepidopteran cell lines (2022) VIRUSES-BASEL. 14(7).
- TXNIP promotes human NK cell development but is dispensable for NK cell functionality (2022) INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 23(19).
- DNA methylation alterations in fractionally irradiated rats and breast cancer patients receiving radiotherapy (2022) INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 23(24).
- Transcriptional dynamics and epigenetic regulation of E and ID protein encoding genes during human T cell development (2022) FRONTIERS IN IMMUNOLOGY. 13.
- Profiling the aerobic window of horses in response to training by means of a modified lactate minimum speed test : flatten the curve (2022) FRONTIERS IN PHYSIOLOGY. 13.
- Metallothioneins alter macrophage phenotype and represent novel therapeutic targets for acetaminophen-induced liver injury (2022) JOURNAL OF LEUKOCYTE BIOLOGY. 111(1). p.123-133
- Lycopene supplementation to serum-free maturation medium improves in vitro bovine embryo development and quality and modulates embryonic transcriptomic profile (2022) ANTIOXIDANTS. 11(2).
- IRF2 is required for development and functional maturation of human NK cells (2022) FRONTIERS IN IMMUNOLOGY. 13.
- The transcription factor RUNX2 drives the generation of human NK cells and promotes tissue residency (2022) ELIFE. 11.
- ADAR1 prevents autoinflammation by suppressing spontaneous ZBP1 activation (2022) NATURE. 607(7920). p.784-789
- Hatching is modulated by microRNA-378a-3p derived from extracellular vesicles secreted by blastocysts (2022) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 119(12).
- RRM2 enhances MYCN-driven neuroblastoma formation and acts as a synergistic target with CHK1 inhibition (2022) SCIENCE ADVANCES. 8(28).
- 2021
- Single cell epigenetic visualization assay (2021) NUCLEIC ACIDS RESEARCH. 49(8).
- PhaLP : a database for the study of phage lytic proteins and their evolution (2021) VIRUSES-BASEL. 13(7).
- Spectral prediction features as a solution for the search space size problem in proteogenomics (2021) MOLECULAR & CELLULAR PROTEOMICS. 20.