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Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: frequent lineage-specific duplications and losses of developmental genes

S Shigenobu, RD Bickel, JA Brisson, T Butts, C-C Chang, Olivier Christiaens UGent, GK Davis, E Duncan, DEK Ferrier and Masatoshi Iga UGent, et al. (2010) INSECT MOLECULAR BIOLOGY. 19(suppl. 2). p.47-62
abstract
Aphids exhibit unique attributes, such as polyphenisms and specialized cells to house endosymbionts, that make them an interesting system for studies at the interface of ecology, evolution and development. Here we present a comprehensive characterization of the developmental genes in the pea aphid, Acyrthosiphon pisum, and compare our results to other sequenced insects. We investigated genes involved in fundamental developmental processes such as establishment of the body plan and organogenesis, focusing on transcription factors and components of signalling pathways. We found that most developmental genes were well conserved in the pea aphid, although many lineage-specific gene duplications and gene losses have occurred in several gene families. In particular, genetic components of transforming growth factor beta (TGF beta) Wnt, JAK/STAT (Janus kinase/signal transducer and activator of transcription) and EGF (Epidermal Growth Factor) pathways appear to have been significantly modified in the pea aphid.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
subject
keyword
genome analysis, aphid, signalling pathway, development, hemimetabolous insect, polyphenism, symbiosis, BEETLE TRIBOLIUM-CASTANEUM, GERM-CELL SPECIFICATION, ASYMMETRIC LOCALIZATION, NEMATOSTELLA-VECTENSIS, WING POLYMORPHISM, PATTERN-FORMATION, DROSOPHILA, EXPRESSION, SEGMENTATION, INSECT
journal title
INSECT MOLECULAR BIOLOGY
Insect Mol. Biol.
volume
19
issue
suppl. 2
issue title
The Aphid Genome
pages
47 - 62
Web of Science type
Article
Web of Science id
000274909200007
JCR category
ENTOMOLOGY
JCR impact factor
2.669 (2010)
JCR rank
5/83 (2010)
JCR quartile
1 (2010)
ISSN
0962-1075
DOI
10.1111/j.1365-2583.2009.00944.x
language
English
UGent publication?
yes
classification
A1
copyright statement
I have transferred the copyright for this publication to the publisher
id
931049
handle
http://hdl.handle.net/1854/LU-931049
date created
2010-04-19 11:35:28
date last changed
2010-04-27 16:47:29
@article{931049,
  abstract     = {Aphids exhibit unique attributes, such as polyphenisms and specialized cells to house endosymbionts, that make them an interesting system for studies at the interface of ecology, evolution and development. Here we present a comprehensive characterization of the developmental genes in the pea aphid, Acyrthosiphon pisum, and compare our results to other sequenced insects. We investigated genes involved in fundamental developmental processes such as establishment of the body plan and organogenesis, focusing on transcription factors and components of signalling pathways. We found that most developmental genes were well conserved in the pea aphid, although many lineage-specific gene duplications and gene losses have occurred in several gene families. In particular, genetic components of transforming growth factor beta (TGF beta) Wnt, JAK/STAT (Janus kinase/signal transducer and activator of transcription) and EGF (Epidermal Growth Factor) pathways appear to have been significantly modified in the pea aphid.},
  author       = {Shigenobu, S and Bickel, RD and Brisson, JA and Butts, T and Chang, C-C and Christiaens, Olivier and Davis, GK and Duncan, E and Ferrier, DEK and Iga, Masatoshi and Janssen, R and Lin, G-W and Lu, H-L and McGregor, AP and Miura, T and Smagghe, Guy and Smith, JM and van der Zee, M and Velarde, R and Wilson, MJ and Daerden, PK and Stern, DL},
  issn         = {0962-1075},
  journal      = {INSECT MOLECULAR BIOLOGY},
  keyword      = {genome analysis,aphid,signalling pathway,development,hemimetabolous insect,polyphenism,symbiosis,BEETLE TRIBOLIUM-CASTANEUM,GERM-CELL SPECIFICATION,ASYMMETRIC LOCALIZATION,NEMATOSTELLA-VECTENSIS,WING POLYMORPHISM,PATTERN-FORMATION,DROSOPHILA,EXPRESSION,SEGMENTATION,INSECT},
  language     = {eng},
  number       = {suppl. 2},
  pages        = {47--62},
  title        = {Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: frequent lineage-specific duplications and losses of developmental genes},
  url          = {http://dx.doi.org/10.1111/j.1365-2583.2009.00944.x},
  volume       = {19},
  year         = {2010},
}

Chicago
Shigenobu, S, RD Bickel, JA Brisson, T Butts, C-C Chang, Olivier Christiaens, GK Davis, et al. 2010. “Comprehensive Survey of Developmental Genes in the Pea Aphid, Acyrthosiphon Pisum: Frequent Lineage-specific Duplications and Losses of Developmental Genes.” Insect Molecular Biology 19 (suppl. 2): 47–62.
APA
Shigenobu, S., Bickel, R., Brisson, J., Butts, T., Chang, C.-C., Christiaens, O., Davis, G., et al. (2010). Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: frequent lineage-specific duplications and losses of developmental genes. INSECT MOLECULAR BIOLOGY, 19(suppl. 2), 47–62.
Vancouver
1.
Shigenobu S, Bickel R, Brisson J, Butts T, Chang C-C, Christiaens O, et al. Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: frequent lineage-specific duplications and losses of developmental genes. INSECT MOLECULAR BIOLOGY. 2010;19(suppl. 2):47–62.
MLA
Shigenobu, S, RD Bickel, JA Brisson, et al. “Comprehensive Survey of Developmental Genes in the Pea Aphid, Acyrthosiphon Pisum: Frequent Lineage-specific Duplications and Losses of Developmental Genes.” INSECT MOLECULAR BIOLOGY 19.suppl. 2 (2010): 47–62. Print.