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Genome sequencing and analysis of the model grass Brachypodium distachyon

(2010) Nature. 463(7282). p.763-768
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Abstract
Three subfamilies of grasses, the Ehrhartoideae, Panicoideae and Pooideae, provide the bulk of human nutrition and are poised to become major sources of renewable energy. Here we describe the genome sequence of the wild grass Brachypodium distachyon (Brachypodium), which is, to our knowledge, the first member of the Pooideae subfamily to be sequenced. Comparison of the Brachypodium, rice and sorghum genomes shows a precise history of genome evolution across a broad diversity of the grasses, and establishes a template for analysis of the large genomes of economically important pooid grasses such as wheat. The high-quality genome sequence, coupled with ease of cultivation and transformation, small size and rapid life cycle, will help Brachypodium reach its potential as an important model system for developing new energy and food crops.
Keywords
ARABIDOPSIS, EVOLUTION, MAP, WHEAT, RICE, TRITICEAE, DIVERGENCE, AGROBACTERIUM-MEDIATED TRANSFORMATION, INTRASPECIES DIVERSITY, RETROTRANSPOSONS

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Citation

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Chicago
Vogel, J.P., D.F. Garvin, T.C. Mockler, J. Schmutz, D. Rokhsar, M.W. Bevan, K. Barry, et al. 2010. “Genome Sequencing and Analysis of the Model Grass Brachypodium Distachyon.” Nature 463 (7282): 763–768.
APA
Vogel, J.P., Garvin, D. F., Mockler, T. C., Schmutz, J., Rokhsar, D., Bevan, M. W., Barry, K., et al. (2010). Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature, 463(7282), 763–768.
Vancouver
1.
Vogel JP, Garvin DF, Mockler TC, Schmutz J, Rokhsar D, Bevan MW, et al. Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature. London, UK: NATURE PUBLISHING GROUP; 2010;463(7282):763–8.
MLA
Vogel, J.P., D.F. Garvin, T.C. Mockler, et al. “Genome Sequencing and Analysis of the Model Grass Brachypodium Distachyon.” Nature 463.7282 (2010): 763–768. Print.
@article{899831,
  abstract     = {Three subfamilies of grasses, the Ehrhartoideae, Panicoideae and Pooideae, provide the bulk of human nutrition and are poised to become major sources of renewable energy. Here we describe the genome sequence of the wild grass Brachypodium distachyon (Brachypodium), which is, to our knowledge, the first member of the Pooideae subfamily to be sequenced. Comparison of the Brachypodium, rice and sorghum genomes shows a precise history of genome evolution across a broad diversity of the grasses, and establishes a template for analysis of the large genomes of economically important pooid grasses such as wheat. The high-quality genome sequence, coupled with ease of cultivation and transformation, small size and rapid life cycle, will help Brachypodium reach its potential as an important model system for developing new energy and food crops.},
  author       = {Vogel, J.P. and Garvin, D.F. and Mockler, T.C. and Schmutz, J. and Rokhsar, D. and Bevan, M.W. and Barry, K. and Lucas, S. and Harmon Smith, M. and Lail, K. and Tice, H. and Schmutz, J. and Grimwood, J. and McKenzie, N. and Bevan, M.W. and Huo, N. and Gu, Y.Q. and Lazo, G.R. and Anderson, O.D. and Vogel, J.P. and You, F.M. and Luo, M.-C. and Dvorak, J. and Wright, J. and Febrer, M. and Bevan, M.W. and Idziak, D. and Hasterok, R. and Garvin, D.F. and Lindquist, E. and Wang, M. and Fox, S.E. and Priest, H.D. and Filichkin, S.A. and Givan, S.A. and Bryant, D.W. and Chang, J.H. and Mockler, T.C. and Wu, H. and Wu, W. and Hsia, A.-P. and Schnable, P.S. and Kalyanaraman, A. and Barbazuk, B. and Michael, T.P. and Hazen, S.P. and Bragg, J.N. and Laudencia Chingcuanco, D. and Vogel, J.P. and Garvin, D.F. and Weng, Y. and McKenzie, N. and Bevan, M.W. and Haberer, G. and Spannagl, M. and Mayer, K. and Rattei, T. and Mitros, T. and Rokhsar, D. and Lee, S.-J. and Rose, J.K.C. and Mueller, L.A. and York, T.L. and Wicker, T. and Buchmann, J.P. and Tanskanen, J. and Schulman, A.H. and Gundlach, H. and Wright, J. and Bevan, M. and Costa de Oliveira, A. and Maia Lda, C. and Belknap, W. and Gu, Y.Q. and Jiang, N. and Lai, J. and Zhu, L. and Ma, J. and Sun, C. and Pritham, E. and Salse, J. and Murat, F. and Abrouk, M. and Haberer, G. and Spannagl, M. and Mayer, K. and Bruggmann, R. and Messing, J. and You, F.M. and Luo, M.-C. and Dvorak, J. and Fahlgren, N. and Fox, S.E. and Sullivan, C.M. and Mockler, T.C. and Carrington, J.C. and Chapman, E.J. and May, G.D. and Zhai, J. and Ganssmann, M. and De Bodt, Stefanie and Verelst, Wim and Inz{\'e}, Dirk},
  issn         = {0028-0836},
  journal      = {Nature},
  keyword      = {ARABIDOPSIS,EVOLUTION,MAP,WHEAT,RICE,TRITICEAE,DIVERGENCE,AGROBACTERIUM-MEDIATED TRANSFORMATION,INTRASPECIES DIVERSITY,RETROTRANSPOSONS},
  language     = {eng},
  number       = {7282},
  pages        = {763--768},
  publisher    = {NATURE PUBLISHING GROUP},
  title        = {Genome sequencing and analysis of the model grass Brachypodium distachyon},
  url          = {http://dx.doi.org/10.1038/nature08747},
  volume       = {463},
  year         = {2010},
}

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