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Genome sequencing and analysis of the model grass Brachypodium distachyon

J.P. Vogel, D.F. Garvin, T.C. Mockler, J. Schmutz, D. Rokhsar, M.W. Bevan, K. Barry, S. Lucas, M. Harmon Smith and K. Lail, et al. (2010) Nature. 463(7282). p.763-768
abstract
Three subfamilies of grasses, the Ehrhartoideae, Panicoideae and Pooideae, provide the bulk of human nutrition and are poised to become major sources of renewable energy. Here we describe the genome sequence of the wild grass Brachypodium distachyon (Brachypodium), which is, to our knowledge, the first member of the Pooideae subfamily to be sequenced. Comparison of the Brachypodium, rice and sorghum genomes shows a precise history of genome evolution across a broad diversity of the grasses, and establishes a template for analysis of the large genomes of economically important pooid grasses such as wheat. The high-quality genome sequence, coupled with ease of cultivation and transformation, small size and rapid life cycle, will help Brachypodium reach its potential as an important model system for developing new energy and food crops.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
subject
keyword
ARABIDOPSIS, EVOLUTION, MAP, WHEAT, RICE, TRITICEAE, DIVERGENCE, AGROBACTERIUM-MEDIATED TRANSFORMATION, INTRASPECIES DIVERSITY, RETROTRANSPOSONS
journal title
Nature
volume
463
issue
7282
pages
763 - 768
publisher
NATURE PUBLISHING GROUP
place of publication
London, UK
Web of Science type
Article
Web of Science id
000274394300030
JCR category
MULTIDISCIPLINARY SCIENCES
JCR impact factor
36.101 (2010)
JCR rank
1/56 (2010)
JCR quartile
1 (2010)
ISSN
0028-0836
DOI
10.1038/nature08747
language
English
UGent publication?
yes
classification
A1
copyright statement
I don't know the status of the copyright for this publication
id
899831
handle
http://hdl.handle.net/1854/LU-899831
date created
2010-03-09 19:45:20
date last changed
2012-09-19 14:04:07
@article{899831,
  abstract     = {Three subfamilies of grasses, the Ehrhartoideae, Panicoideae and Pooideae, provide the bulk of human nutrition and are poised to become major sources of renewable energy. Here we describe the genome sequence of the wild grass Brachypodium distachyon (Brachypodium), which is, to our knowledge, the first member of the Pooideae subfamily to be sequenced. Comparison of the Brachypodium, rice and sorghum genomes shows a precise history of genome evolution across a broad diversity of the grasses, and establishes a template for analysis of the large genomes of economically important pooid grasses such as wheat. The high-quality genome sequence, coupled with ease of cultivation and transformation, small size and rapid life cycle, will help Brachypodium reach its potential as an important model system for developing new energy and food crops.},
  author       = {Vogel, J.P. and Garvin, D.F. and Mockler, T.C. and Schmutz, J. and Rokhsar, D. and Bevan, M.W. and Barry, K. and Lucas, S. and Harmon Smith, M. and Lail, K. and Tice, H. and Schmutz, J. and Grimwood, J. and McKenzie, N. and Bevan, M.W. and Huo, N. and Gu, Y.Q. and Lazo, G.R. and Anderson, O.D. and Vogel, J.P. and You, F.M. and Luo, M.-C. and Dvorak, J. and Wright, J. and Febrer, M. and Bevan, M.W. and Idziak, D. and Hasterok, R. and Garvin, D.F. and Lindquist, E. and Wang, M. and Fox, S.E. and Priest, H.D. and Filichkin, S.A. and Givan, S.A. and Bryant, D.W. and Chang, J.H. and Mockler, T.C. and Wu, H. and Wu, W. and Hsia, A.-P. and Schnable, P.S. and Kalyanaraman, A. and Barbazuk, B. and Michael, T.P. and Hazen, S.P. and Bragg, J.N. and Laudencia Chingcuanco, D. and Vogel, J.P. and Garvin, D.F. and Weng, Y. and McKenzie, N. and Bevan, M.W. and Haberer, G. and Spannagl, M. and Mayer, K. and Rattei, T. and Mitros, T. and Rokhsar, D. and Lee, S.-J. and Rose, J.K.C. and Mueller, L.A. and York, T.L. and Wicker, T. and Buchmann, J.P. and Tanskanen, J. and Schulman, A.H. and Gundlach, H. and Wright, J. and Bevan, M. and Costa de Oliveira, A. and Maia Lda, C. and Belknap, W. and Gu, Y.Q. and Jiang, N. and Lai, J. and Zhu, L. and Ma, J. and Sun, C. and Pritham, E. and Salse, J. and Murat, F. and Abrouk, M. and Haberer, G. and Spannagl, M. and Mayer, K. and Bruggmann, R. and Messing, J. and You, F.M. and Luo, M.-C. and Dvorak, J. and Fahlgren, N. and Fox, S.E. and Sullivan, C.M. and Mockler, T.C. and Carrington, J.C. and Chapman, E.J. and May, G.D. and Zhai, J. and Ganssmann, M. and De Bodt, Stefanie and Verelst, Wim and Inz{\'e}, Dirk},
  issn         = {0028-0836},
  journal      = {Nature},
  keyword      = {ARABIDOPSIS,EVOLUTION,MAP,WHEAT,RICE,TRITICEAE,DIVERGENCE,AGROBACTERIUM-MEDIATED TRANSFORMATION,INTRASPECIES DIVERSITY,RETROTRANSPOSONS},
  language     = {eng},
  number       = {7282},
  pages        = {763--768},
  publisher    = {NATURE PUBLISHING GROUP},
  title        = {Genome sequencing and analysis of the model grass Brachypodium distachyon},
  url          = {http://dx.doi.org/10.1038/nature08747},
  volume       = {463},
  year         = {2010},
}

Chicago
Vogel, J.P., D.F. Garvin, T.C. Mockler, J. Schmutz, D. Rokhsar, M.W. Bevan, K. Barry, et al. 2010. “Genome Sequencing and Analysis of the Model Grass Brachypodium Distachyon.” Nature 463 (7282): 763–768.
APA
Vogel, J. P., Garvin, D. F., Mockler, T. C., Schmutz, J., Rokhsar, D., Bevan, M. W., Barry, K., et al. (2010). Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature, 463(7282), 763–768.
Vancouver
1.
Vogel JP, Garvin DF, Mockler TC, Schmutz J, Rokhsar D, Bevan MW, et al. Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature. London, UK: NATURE PUBLISHING GROUP; 2010;463(7282):763–8.
MLA
Vogel, J.P., D.F. Garvin, T.C. Mockler, et al. “Genome Sequencing and Analysis of the Model Grass Brachypodium Distachyon.” Nature 463.7282 (2010): 763–768. Print.