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Translational profile of developing phellem cells in Arabidopsis thaliana roots

(2022) PLANT JOURNAL. 110(3). p.899-915
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Abstract
The phellem is a specialized boundary tissue providing the first line of defense against abiotic and biotic stresses in organs undergoing secondary growth. Phellem cells undergo several differentiation steps, which include cell wall suberization, cell expansion and programmed cell death. Yet, the molecular players acting particularly in phellem cell differentiation remain poorly described, particularly in the widely used model plant Arabidopsis thaliana. Using specific marker lines we followed the onset and progression of phellem differentiation in A. thaliana roots, and further targeted the translatome of new developed phellem cells using Translating Ribosome Affinity Purification followed by mRNA sequencing (TRAP-SEQ). We showed that phellem suberization is initiated early after phellogen (cork cambium) division. The specific translational landscape was organized in three main domains related to energy production, synthesis and transport of cell wall components, and response to stimulus. Novel players in phellem differentiation, related to suberin monomer transport and assembly, as well as novel transcription regulators were identified. This strategy provided an unprecedented resolution of the translatome of developing phellem cells, giving a detailed and specific view on the molecular mechanisms acting on cell differentiation in periderm tissues of the model plant Arabidopsis.
Keywords
Arabidopsis thaliana, phellem, secondary development, suberin, translatome.

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Citation

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MLA
Mendes Leal, Ana Rita, et al. “Translational Profile of Developing Phellem Cells in Arabidopsis Thaliana Roots.” PLANT JOURNAL, vol. 110, no. 3, 2022, pp. 899–915, doi:10.1111/tpj.15691.
APA
Mendes Leal, A. R., Barros, P. M., Parizot, B., Sapeta, H., Vangheluwe, N., Andersen, T. G., … Oliveira, M. M. (2022). Translational profile of developing phellem cells in Arabidopsis thaliana roots. PLANT JOURNAL, 110(3), 899–915. https://doi.org/10.1111/tpj.15691
Chicago author-date
Mendes Leal, Ana Rita, Pedro Miguel Barros, Boris Parizot, Helena Sapeta, Nick Vangheluwe, Tonni Grube Andersen, Tom Beeckman, and M. Margarida Oliveira. 2022. “Translational Profile of Developing Phellem Cells in Arabidopsis Thaliana Roots.” PLANT JOURNAL 110 (3): 899–915. https://doi.org/10.1111/tpj.15691.
Chicago author-date (all authors)
Mendes Leal, Ana Rita, Pedro Miguel Barros, Boris Parizot, Helena Sapeta, Nick Vangheluwe, Tonni Grube Andersen, Tom Beeckman, and M. Margarida Oliveira. 2022. “Translational Profile of Developing Phellem Cells in Arabidopsis Thaliana Roots.” PLANT JOURNAL 110 (3): 899–915. doi:10.1111/tpj.15691.
Vancouver
1.
Mendes Leal AR, Barros PM, Parizot B, Sapeta H, Vangheluwe N, Andersen TG, et al. Translational profile of developing phellem cells in Arabidopsis thaliana roots. PLANT JOURNAL. 2022;110(3):899–915.
IEEE
[1]
A. R. Mendes Leal et al., “Translational profile of developing phellem cells in Arabidopsis thaliana roots,” PLANT JOURNAL, vol. 110, no. 3, pp. 899–915, 2022.
@article{8739836,
  abstract     = {{The phellem is a specialized boundary tissue providing the first line of defense against abiotic and biotic stresses in organs undergoing secondary growth. Phellem cells undergo several differentiation steps, which include cell wall suberization, cell expansion and programmed cell death. Yet, the molecular players acting particularly in phellem cell differentiation remain poorly described, particularly in the widely used model plant Arabidopsis thaliana.

Using specific marker lines we followed the onset and progression of phellem differentiation in A. thaliana roots, and further targeted the translatome of new developed phellem cells using Translating Ribosome Affinity Purification followed by mRNA sequencing (TRAP-SEQ).

We showed that phellem suberization is initiated early after phellogen (cork cambium) division. The specific translational landscape was organized in three main domains related to energy production, synthesis and transport of cell wall components, and response to stimulus. Novel players in phellem differentiation, related to suberin monomer transport and assembly, as well as novel transcription regulators were identified.

This strategy provided an unprecedented resolution of the translatome of developing phellem cells, giving a detailed and specific view on the molecular mechanisms acting on cell differentiation in periderm tissues of the model plant Arabidopsis.}},
  author       = {{Mendes Leal, Ana Rita and Barros, Pedro Miguel and Parizot, Boris and Sapeta, Helena and Vangheluwe, Nick and Andersen, Tonni Grube and Beeckman, Tom and Oliveira, M. Margarida}},
  issn         = {{0960-7412}},
  journal      = {{PLANT JOURNAL}},
  keywords     = {{Arabidopsis thaliana,phellem,secondary development,suberin,translatome.}},
  language     = {{eng}},
  number       = {{3}},
  pages        = {{899--915}},
  title        = {{Translational profile of developing phellem cells in Arabidopsis thaliana roots}},
  url          = {{http://doi.org/10.1111/tpj.15691}},
  volume       = {{110}},
  year         = {{2022}},
}

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