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The enzyme interactome concept in filamentous fungi linked to biomass valorization

Antonielle Vieira Monclaro (UGent) , Caio de Oliveira Gorgulho Silva, Helder Andrey Rocha Gomes, Leonora Rios de Souza Moreira and Edivaldo Ximenes Ferreira Filho
(2022) BIORESOURCE TECHNOLOGY. 344(A).
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Abstract
Biomass represents an abundant and inexpensive source of sugars and aromatic compounds that can be used as raw materials for conversion into value-added bioproducts. Filamentous fungi are sources of plant cell wall degrading enzymes in nature. Understanding the interactions between enzymes is crucial for optimizing biomass degradation processes. Herein, the concept of the interactome is presented as a holistic approach that depicts the interactions among enzymes, substrates, metabolites, and inhibitors. The interactome encompasses several stages of biomass degradation, starting with the sensing of the substrate and the subsequent synthesis of hydrolytic and oxidative enzymes (fungus-substrate interaction). Enzyme-enzyme interactions are exemplified in the complex processes of lignocellulosic biomass degradation. The enzyme-substrate-metabolite-inhibitor interaction also provides a better understanding of biomass conversion, allowing bioproduct production from recalcitrant agro-industrial residues, thus bringing greater value to residual biomass. Finally, technological applications are presented for optimizing the interactome at various levels.
Keywords
Enzyme interactome, Lignocellulose Biomass valorization, Filamentous fungi, Saccharification, LIGNOCELLULOSIC BIOMASS, CELLULOSE HYDROLYSIS, DEGRADING ENZYMES, WHEAT-STRAW, LIGNIN, PRETREATMENT, XYLANASE, DEGRADATION, CELLULASES, SACCHARIFICATION

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MLA
Vieira Monclaro, Antonielle, et al. “The Enzyme Interactome Concept in Filamentous Fungi Linked to Biomass Valorization.” BIORESOURCE TECHNOLOGY, vol. 344, no. A, 2022, doi:10.1016/j.biortech.2021.126200.
APA
Vieira Monclaro, A., Silva, C. de O. G., Gomes, H. A. R., Moreira, L. R. de S., & Ferreira Filho, E. X. (2022). The enzyme interactome concept in filamentous fungi linked to biomass valorization. BIORESOURCE TECHNOLOGY, 344(A). https://doi.org/10.1016/j.biortech.2021.126200
Chicago author-date
Vieira Monclaro, Antonielle, Caio de Oliveira Gorgulho Silva, Helder Andrey Rocha Gomes, Leonora Rios de Souza Moreira, and Edivaldo Ximenes Ferreira Filho. 2022. “The Enzyme Interactome Concept in Filamentous Fungi Linked to Biomass Valorization.” BIORESOURCE TECHNOLOGY 344 (A). https://doi.org/10.1016/j.biortech.2021.126200.
Chicago author-date (all authors)
Vieira Monclaro, Antonielle, Caio de Oliveira Gorgulho Silva, Helder Andrey Rocha Gomes, Leonora Rios de Souza Moreira, and Edivaldo Ximenes Ferreira Filho. 2022. “The Enzyme Interactome Concept in Filamentous Fungi Linked to Biomass Valorization.” BIORESOURCE TECHNOLOGY 344 (A). doi:10.1016/j.biortech.2021.126200.
Vancouver
1.
Vieira Monclaro A, Silva C de OG, Gomes HAR, Moreira LR de S, Ferreira Filho EX. The enzyme interactome concept in filamentous fungi linked to biomass valorization. BIORESOURCE TECHNOLOGY. 2022;344(A).
IEEE
[1]
A. Vieira Monclaro, C. de O. G. Silva, H. A. R. Gomes, L. R. de S. Moreira, and E. X. Ferreira Filho, “The enzyme interactome concept in filamentous fungi linked to biomass valorization,” BIORESOURCE TECHNOLOGY, vol. 344, no. A, 2022.
@article{8731329,
  abstract     = {{Biomass represents an abundant and inexpensive source of sugars and aromatic compounds that can be used as raw materials for conversion into value-added bioproducts. Filamentous fungi are sources of plant cell wall degrading enzymes in nature. Understanding the interactions between enzymes is crucial for optimizing biomass degradation processes. Herein, the concept of the interactome is presented as a holistic approach that depicts the interactions among enzymes, substrates, metabolites, and inhibitors. The interactome encompasses several stages of biomass degradation, starting with the sensing of the substrate and the subsequent synthesis of hydrolytic and oxidative enzymes (fungus-substrate interaction). Enzyme-enzyme interactions are exemplified in the complex processes of lignocellulosic biomass degradation. The enzyme-substrate-metabolite-inhibitor interaction also provides a better understanding of biomass conversion, allowing bioproduct production from recalcitrant agro-industrial residues, thus bringing greater value to residual biomass. Finally, technological applications are presented for optimizing the interactome at various levels.}},
  articleno    = {{126200}},
  author       = {{Vieira Monclaro, Antonielle and Silva, Caio de Oliveira Gorgulho and Gomes, Helder Andrey Rocha and Moreira, Leonora Rios de Souza and Ferreira Filho, Edivaldo Ximenes}},
  issn         = {{0960-8524}},
  journal      = {{BIORESOURCE TECHNOLOGY}},
  keywords     = {{Enzyme interactome,Lignocellulose Biomass valorization,Filamentous fungi,Saccharification,LIGNOCELLULOSIC BIOMASS,CELLULOSE HYDROLYSIS,DEGRADING ENZYMES,WHEAT-STRAW,LIGNIN,PRETREATMENT,XYLANASE,DEGRADATION,CELLULASES,SACCHARIFICATION}},
  language     = {{eng}},
  number       = {{A}},
  pages        = {{12}},
  title        = {{The enzyme interactome concept in filamentous fungi linked to biomass valorization}},
  url          = {{http://dx.doi.org/10.1016/j.biortech.2021.126200}},
  volume       = {{344}},
  year         = {{2022}},
}
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