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Spirosoma utsteinense sp. nov. isolated from Antarctic ice-free soils from the Utsteinen region, East Antarctica

Guillaume Tahon (UGent) , Liesbeth Lebbe (UGent) and Anne Willems (UGent)
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Abstract
Between 2014 and 2016, 16 Gram-stain-negative, aerobic, rod-shaped and yellow-orange pigmented bacteria were isolated from exposed soils from the Utsteinen region, Sor Rondane Mountains, East Antarctica. Analysis of their 16S rRNA gene sequences revealed that the strains form a separate cluster in the genus Spirosoma, with Spirosoma rigui KCTC 12531(T) as its closest neighbour (97.8 % sequence similarity). Comparative genome analysis of two representative strains (i.e. R-68523(T) and R-68079) of the new group with the type strains of Spirosoma rigui (its closest neighbour) and Spirosoma linguale (type species of the genus), yielded average nucleotide identity values of 73.9-78.7%. Digital DNA-DNA reassociation values of the two strains and these type strains ranged from 20.3 to 22.0%. The predominant cellular fatty acids of the two novel strains were summed feature 3 (i.e. C-16:1 omega 7c and/or iso-C-15 2-OH), C-16:1 omega 5c, C-16:0 and iso-C-15:0. The new Spirosoma strains grew with 0-0.5 % (w/v) NaCl, at pH 6.5-8.0 and displayed optimum growth between 15 and 25 degrees C. Based on the results of phenotypic, genomic, phylogenetic and chemotaxonomic analyses, the new strains represent a novel species of the genus Spirosoma for which the name Spirosoma utsteinense sp. nov. is proposed. The type strain is R-68523(T) (=LMG 31447(T)=CECT 9925(T)).
Keywords
Spirosoma, Antarctica, ice-free soil, GENOME, DATABASE, PHOSPHATE

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MLA
Tahon, Guillaume, et al. “Spirosoma Utsteinense Sp. Nov. Isolated from Antarctic Ice-Free Soils from the Utsteinen Region, East Antarctica.” INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, vol. 71, no. 3, 2021, doi:10.1099/ijsem.0.004754.
APA
Tahon, G., Lebbe, L., & Willems, A. (2021). Spirosoma utsteinense sp. nov. isolated from Antarctic ice-free soils from the Utsteinen region, East Antarctica. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 71(3). https://doi.org/10.1099/ijsem.0.004754
Chicago author-date
Tahon, Guillaume, Liesbeth Lebbe, and Anne Willems. 2021. “Spirosoma Utsteinense Sp. Nov. Isolated from Antarctic Ice-Free Soils from the Utsteinen Region, East Antarctica.” INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 71 (3). https://doi.org/10.1099/ijsem.0.004754.
Chicago author-date (all authors)
Tahon, Guillaume, Liesbeth Lebbe, and Anne Willems. 2021. “Spirosoma Utsteinense Sp. Nov. Isolated from Antarctic Ice-Free Soils from the Utsteinen Region, East Antarctica.” INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 71 (3). doi:10.1099/ijsem.0.004754.
Vancouver
1.
Tahon G, Lebbe L, Willems A. Spirosoma utsteinense sp. nov. isolated from Antarctic ice-free soils from the Utsteinen region, East Antarctica. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 2021;71(3).
IEEE
[1]
G. Tahon, L. Lebbe, and A. Willems, “Spirosoma utsteinense sp. nov. isolated from Antarctic ice-free soils from the Utsteinen region, East Antarctica,” INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, vol. 71, no. 3, 2021.
@article{8723810,
  abstract     = {{Between 2014 and 2016, 16 Gram-stain-negative, aerobic, rod-shaped and yellow-orange pigmented bacteria were isolated from exposed soils from the Utsteinen region, Sor Rondane Mountains, East Antarctica. Analysis of their 16S rRNA gene sequences revealed that the strains form a separate cluster in the genus Spirosoma, with Spirosoma rigui KCTC 12531(T) as its closest neighbour (97.8 % sequence similarity). Comparative genome analysis of two representative strains (i.e. R-68523(T) and R-68079) of the new group with the type strains of Spirosoma rigui (its closest neighbour) and Spirosoma linguale (type species of the genus), yielded average nucleotide identity values of 73.9-78.7%. Digital DNA-DNA reassociation values of the two strains and these type strains ranged from 20.3 to 22.0%. The predominant cellular fatty acids of the two novel strains were summed feature 3 (i.e. C-16:1 omega 7c and/or iso-C-15 2-OH), C-16:1 omega 5c, C-16:0 and iso-C-15:0. The new Spirosoma strains grew with 0-0.5 % (w/v) NaCl, at pH 6.5-8.0 and displayed optimum growth between 15 and 25 degrees C. Based on the results of phenotypic, genomic, phylogenetic and chemotaxonomic analyses, the new strains represent a novel species of the genus Spirosoma for which the name Spirosoma utsteinense sp. nov. is proposed. The type strain is R-68523(T) (=LMG 31447(T)=CECT 9925(T)).}},
  articleno    = {{004754}},
  author       = {{Tahon, Guillaume and Lebbe, Liesbeth and Willems, Anne}},
  issn         = {{1466-5026}},
  journal      = {{INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY}},
  keywords     = {{Spirosoma,Antarctica,ice-free soil,GENOME,DATABASE,PHOSPHATE}},
  language     = {{eng}},
  number       = {{3}},
  pages        = {{12}},
  title        = {{Spirosoma utsteinense sp. nov. isolated from Antarctic ice-free soils from the Utsteinen region, East Antarctica}},
  url          = {{http://doi.org/10.1099/ijsem.0.004754}},
  volume       = {{71}},
  year         = {{2021}},
}

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