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Universal Spectrum Identifier for mass spectra

(2021) NATURE METHODS. 18(7). p.768-770
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Abstract
Mass spectra provide the ultimate evidence to support the findings of mass spectrometry proteomics studies in publications, and it is therefore crucial to be able to trace the conclusions back to the spectra. The Universal Spectrum Identifier (USI) provides a standardized mechanism for encoding a virtual path to any mass spectrum contained in datasets deposited to public proteomics repositories. USI enables greater transparency of spectral evidence, with more than 1 billion USI identifications from over 3 billion spectra already available through ProteomeXchange repositories.
Keywords
Biotechnology, Cell Biology, Biochemistry, Molecular Biology, HUMAN PROTEOME ORGANIZATION, CONSORTIUM

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Citation

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MLA
Deutsch, Eric W., et al. “Universal Spectrum Identifier for Mass Spectra.” NATURE METHODS, vol. 18, no. 7, 2021, pp. 768–70, doi:10.1038/s41592-021-01184-6.
APA
Deutsch, E. W., Perez-Riverol, Y., Carver, J., Kawano, S., Mendoza, L., Van Den Bossche, T., … Bandeira, N. (2021). Universal Spectrum Identifier for mass spectra. NATURE METHODS, 18(7), 768–770. https://doi.org/10.1038/s41592-021-01184-6
Chicago author-date
Deutsch, Eric W., Yasset Perez-Riverol, Jeremy Carver, Shin Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, et al. 2021. “Universal Spectrum Identifier for Mass Spectra.” NATURE METHODS 18 (7): 768–70. https://doi.org/10.1038/s41592-021-01184-6.
Chicago author-date (all authors)
Deutsch, Eric W., Yasset Perez-Riverol, Jeremy Carver, Shin Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, Pierre-Alain Binz, Benjamin Pullman, Zhi Sun, Jim Shofstahl, Wout Bittremieux, Tytus D. Mak, Joshua Klein, Yunping Zhu, Henry Lam, Juan Antonio Vizcaíno, and Nuno Bandeira. 2021. “Universal Spectrum Identifier for Mass Spectra.” NATURE METHODS 18 (7): 768–770. doi:10.1038/s41592-021-01184-6.
Vancouver
1.
Deutsch EW, Perez-Riverol Y, Carver J, Kawano S, Mendoza L, Van Den Bossche T, et al. Universal Spectrum Identifier for mass spectra. NATURE METHODS. 2021;18(7):768–70.
IEEE
[1]
E. W. Deutsch et al., “Universal Spectrum Identifier for mass spectra,” NATURE METHODS, vol. 18, no. 7, pp. 768–770, 2021.
@article{8716913,
  abstract     = {{Mass spectra provide the ultimate evidence to support the findings of mass spectrometry proteomics studies in publications, and it is therefore crucial to be able to trace the conclusions back to the spectra. The Universal Spectrum Identifier (USI) provides a standardized mechanism for encoding a virtual path to any mass spectrum contained in datasets deposited to public proteomics repositories. USI enables greater transparency of spectral evidence, with more than 1 billion USI identifications from over 3 billion spectra already available through ProteomeXchange repositories.}},
  author       = {{Deutsch, Eric W. and Perez-Riverol, Yasset and Carver, Jeremy and Kawano, Shin and Mendoza, Luis and Van Den Bossche, Tim and Gabriels, Ralf and Binz, Pierre-Alain and Pullman, Benjamin and Sun, Zhi and Shofstahl, Jim and Bittremieux, Wout and Mak, Tytus D. and Klein, Joshua and Zhu, Yunping and Lam, Henry and Vizcaíno, Juan Antonio and Bandeira, Nuno}},
  issn         = {{1548-7091}},
  journal      = {{NATURE METHODS}},
  keywords     = {{Biotechnology,Cell Biology,Biochemistry,Molecular Biology,HUMAN PROTEOME ORGANIZATION,CONSORTIUM}},
  language     = {{eng}},
  number       = {{7}},
  pages        = {{768--770}},
  title        = {{Universal Spectrum Identifier for mass spectra}},
  url          = {{http://dx.doi.org/10.1038/s41592-021-01184-6}},
  volume       = {{18}},
  year         = {{2021}},
}

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