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Development of a soil fertility index using on-line Vis-NIR spectroscopy

Muhammad Abdul Munnaf (UGent) and Abdul Mouazen (UGent)
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Abstract
Soil fertility index (SFI) is commonly used for soil fertility assessment, which is critical for managing in-field variabilities and maximizing crop production with minimum environmental impacts. However, the majority of earlier SFIs were laboratory-based soil analyses. This study developed a novel SFI using on-line collected visible and near-infrared (vis-NIR) spectra. Six agricultural fields were scanned using an on-line vis-NIR sensor (CompactSpec, Tec5 Technology, Germany), when 139 soil samples were collected and analyzed for soil pH, organic carbon, available- phosphorous (P), potassium, magnesium (Mg), calcium, sodium, moisture content (MC) and cation exchange capacity. A minimum dataset was developed comprising the fertility attributes that showed pairwise correlation (r) smaller than 0.75. This was followed by a principal component analysis to calculate the weight factor of each parameter to be used in the SFI formulation using a double-weighted additive function. The data matrix consisting of the SFI and soil spectra was divided into calibration (70 %) and prediction (30 %) datasets. The former set was subjected to a partial least squares regression to calibrate SFI model, whose accuracy was validated using the prediction set. Results showed that the derived SFI was moderately to highly correlated with P (r = 0.57), pH (r = 0.75), and Mg (r = 0.74) and weakly correlated with MC (r = 0.26). The on- line vis-NIR sensor predicted SFI with very good accuracy [coefficient of determination (R2) = 0.75 and ratio of prediction to deviation (RPD) = 2.01]. Therefore, it is concluded that the vis-NIR can accurately predict SFI directly from on-line scanned soil spectra, which can effectively assess soil fertility and manage in-field variability.
Keywords
Spatial variation in soil fertility, Principal component analysis, Partial least squares regression, Visible and near-infrared reflectance spectroscopy, Minimum dataset, PRODUCTION SYSTEMS, ORGANIC-CARBON, QUALITY, AVAILABILITY, PREDICTION, SELECTION, ACCURACY, SPECTRA, YIELD

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MLA
Munnaf, Muhammad Abdul, and Abdul Mouazen. “Development of a Soil Fertility Index Using On-Line Vis-NIR Spectroscopy.” COMPUTERS AND ELECTRONICS IN AGRICULTURE, vol. 188, 2021, doi:10.1016/j.compag.2021.106341.
APA
Munnaf, M. A., & Mouazen, A. (2021). Development of a soil fertility index using on-line Vis-NIR spectroscopy. COMPUTERS AND ELECTRONICS IN AGRICULTURE, 188. https://doi.org/10.1016/j.compag.2021.106341
Chicago author-date
Munnaf, Muhammad Abdul, and Abdul Mouazen. 2021. “Development of a Soil Fertility Index Using On-Line Vis-NIR Spectroscopy.” COMPUTERS AND ELECTRONICS IN AGRICULTURE 188. https://doi.org/10.1016/j.compag.2021.106341.
Chicago author-date (all authors)
Munnaf, Muhammad Abdul, and Abdul Mouazen. 2021. “Development of a Soil Fertility Index Using On-Line Vis-NIR Spectroscopy.” COMPUTERS AND ELECTRONICS IN AGRICULTURE 188. doi:10.1016/j.compag.2021.106341.
Vancouver
1.
Munnaf MA, Mouazen A. Development of a soil fertility index using on-line Vis-NIR spectroscopy. COMPUTERS AND ELECTRONICS IN AGRICULTURE. 2021;188.
IEEE
[1]
M. A. Munnaf and A. Mouazen, “Development of a soil fertility index using on-line Vis-NIR spectroscopy,” COMPUTERS AND ELECTRONICS IN AGRICULTURE, vol. 188, 2021.
@article{8716612,
  abstract     = {{Soil fertility index (SFI) is commonly used for soil fertility assessment, which is critical for managing in-field variabilities and maximizing crop production with minimum environmental impacts. However, the majority of earlier SFIs were laboratory-based soil analyses. This study developed a novel SFI using on-line collected visible and near-infrared (vis-NIR) spectra. Six agricultural fields were scanned using an on-line vis-NIR sensor (CompactSpec, Tec5 Technology, Germany), when 139 soil samples were collected and analyzed for soil pH, organic carbon, available- phosphorous (P), potassium, magnesium (Mg), calcium, sodium, moisture content (MC) and cation exchange capacity. A minimum dataset was developed comprising the fertility attributes that showed pairwise correlation (r) smaller than 0.75. This was followed by a principal component analysis to calculate the weight factor of each parameter to be used in the SFI formulation using a double-weighted additive function. The data matrix consisting of the SFI and soil spectra was divided into calibration (70 %) and prediction (30 %) datasets. The former set was subjected to a partial least squares regression to calibrate SFI model, whose accuracy was validated using the prediction set. Results showed that the derived SFI was moderately to highly correlated with P (r = 0.57), pH (r = 0.75), and Mg (r = 0.74) and weakly correlated with MC (r = 0.26). The on- line vis-NIR sensor predicted SFI with very good accuracy [coefficient of determination (R2) = 0.75 and ratio of prediction to deviation (RPD) = 2.01]. Therefore, it is concluded that the vis-NIR can accurately predict SFI directly from on-line scanned soil spectra, which can effectively assess soil fertility and manage in-field variability.}},
  articleno    = {{106341}},
  author       = {{Munnaf, Muhammad Abdul and Mouazen, Abdul}},
  issn         = {{0168-1699}},
  journal      = {{COMPUTERS AND ELECTRONICS IN AGRICULTURE}},
  keywords     = {{Spatial variation in soil fertility,Principal component analysis,Partial least squares regression,Visible and near-infrared reflectance spectroscopy,Minimum dataset,PRODUCTION SYSTEMS,ORGANIC-CARBON,QUALITY,AVAILABILITY,PREDICTION,SELECTION,ACCURACY,SPECTRA,YIELD}},
  language     = {{eng}},
  pages        = {{11}},
  title        = {{Development of a soil fertility index using on-line Vis-NIR spectroscopy}},
  url          = {{http://doi.org/10.1016/j.compag.2021.106341}},
  volume       = {{188}},
  year         = {{2021}},
}

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