Academic Bibliography

 Search 200 years of publications by Ghent University researchers.
Advanced search
1 file | 6.13 MB
Add to list
  1. Search results
  2. Targeted sequencing supports morpholo...

Targeted sequencing supports morphology and embryo features in resolving the classification of Cyperaceae tribe Fuireneae s.l.

Julian R. Starr, Pedro Jiménez‐Mejías, Alexandre R. Zuntini, Étienne Léveillé‐Bourret, Ilias Semmouri (UGent) , Muthama Muasya, William J. Baker, Grace E. Brewer, Niroshini Epitawalage, Isabel Fairlie, et al.
(2021) JOURNAL OF SYSTEMATICS AND EVOLUTION. 59(4). p.809-832
Author
Organization
Abstract
Molecular phylogenetic studies based on Sanger sequences have shown that Cyperaceae tribe Fuireneae s.l. is paraphyletic. However, taxonomic sampling in these studies has been poor, topologies have been inconsistent, and support for the backbone of trees has been weak. Moreover, uncertainty still surrounds the morphological limits of Schoenoplectiella, a genus of mainly small, amphicarpic annuals that was recently segregated from Schoenoplectus. Consequently, despite ample evidence from molecular analyses that Fuireneae s.l. might consist of two to four tribal lineages, no taxonomic changes have yet been made. Here, we use the Angiosperms353 enrichment panel for targeted sequencing in order to: (1) clarify the relationships of Fuireneae s.l. with the related tribes Abildgaardieae, Eleocharideae and Cypereae; (2) define the limits of Fuireneae s.s., and (3) test the monophyly of Fuireneae s.l. genera with emphasis on Schoenoplectus and Schoenoplectiella. Using more than a third of Fuireneae s.l. diversity, our phylogenomic analyses strongly support six genera and four major Fuireneae s.l. clades that we recognise as tribes: Bolboschoeneae stat.nov., Fuireneae s.s., Schoenoplecteae, and Pseudoschoeneae tr.nov. These results are consistent with morphological, micromorphological (nutlet epidermal cell shape), and embryo differences detected for each tribe. At the generic level, most sub‐Saharan African perennials currently treated in Schoenoplectus are transferred to Schoenoplectiella. Our targeted sequencing results show that these species are nested in Schoenoplectiella, and their treatment here is consistent with micromorphological and embryo characters shared by all Schoenoplectiella species. Keys to recognised tribes and genera are provided.
Keywords
Plant Science, Ecology, Evolution, Behavior and Systematics, Angiosperms353, classification, Cyperaceae, Fuireneae, targeted sequencing, taxon limits, taxonomy

Downloads

  • Download
    published article.pdf
    • full text (Published version)
    • |
    • open access
    • |
    • PDF
    • |
    • 6.13 MB

Citation

Please use this url to cite or link to this publication:

MLA
Starr, Julian R., et al. “Targeted Sequencing Supports Morphology and Embryo Features in Resolving the Classification of Cyperaceae Tribe Fuireneae s.l.” JOURNAL OF SYSTEMATICS AND EVOLUTION, vol. 59, no. 4, 2021, pp. 809–32, doi:10.1111/jse.12721.
APA
Starr, J. R., Jiménez‐Mejías, P., Zuntini, A. R., Léveillé‐Bourret, É., Semmouri, I., Muasya, M., … Larridon, I. (2021). Targeted sequencing supports morphology and embryo features in resolving the classification of Cyperaceae tribe Fuireneae s.l. JOURNAL OF SYSTEMATICS AND EVOLUTION, 59(4), 809–832. https://doi.org/10.1111/jse.12721
Chicago author-date
Starr, Julian R., Pedro Jiménez‐Mejías, Alexandre R. Zuntini, Étienne Léveillé‐Bourret, Ilias Semmouri, Muthama Muasya, William J. Baker, et al. 2021. “Targeted Sequencing Supports Morphology and Embryo Features in Resolving the Classification of Cyperaceae Tribe Fuireneae s.l.” JOURNAL OF SYSTEMATICS AND EVOLUTION 59 (4): 809–32. https://doi.org/10.1111/jse.12721.
Chicago author-date (all authors)
Starr, Julian R., Pedro Jiménez‐Mejías, Alexandre R. Zuntini, Étienne Léveillé‐Bourret, Ilias Semmouri, Muthama Muasya, William J. Baker, Grace E. Brewer, Niroshini Epitawalage, Isabel Fairlie, Félix Forest, Izai A.B. Sabino Kikuchi, Lisa Pokorny, and Isabel Larridon. 2021. “Targeted Sequencing Supports Morphology and Embryo Features in Resolving the Classification of Cyperaceae Tribe Fuireneae s.l.” JOURNAL OF SYSTEMATICS AND EVOLUTION 59 (4): 809–832. doi:10.1111/jse.12721.
Vancouver
1.
Starr JR, Jiménez‐Mejías P, Zuntini AR, Léveillé‐Bourret É, Semmouri I, Muasya M, et al. Targeted sequencing supports morphology and embryo features in resolving the classification of Cyperaceae tribe Fuireneae s.l. JOURNAL OF SYSTEMATICS AND EVOLUTION. 2021;59(4):809–32.
IEEE
[1]
J. R. Starr et al., “Targeted sequencing supports morphology and embryo features in resolving the classification of Cyperaceae tribe Fuireneae s.l.,” JOURNAL OF SYSTEMATICS AND EVOLUTION, vol. 59, no. 4, pp. 809–832, 2021.
@article{8696558,
  abstract     = {{Molecular phylogenetic studies based on Sanger sequences have shown that Cyperaceae tribe Fuireneae s.l. is paraphyletic. However, taxonomic sampling in these studies has been poor, topologies have been inconsistent, and support for the backbone of trees has been weak. Moreover, uncertainty still surrounds the morphological limits of Schoenoplectiella, a genus of mainly small, amphicarpic annuals that was recently segregated from Schoenoplectus. Consequently, despite ample evidence from molecular analyses that Fuireneae s.l. might consist of two to four tribal lineages, no taxonomic changes have yet been made. Here, we use the Angiosperms353 enrichment panel for targeted sequencing in order to: (1) clarify the relationships of Fuireneae s.l. with the related tribes Abildgaardieae, Eleocharideae and Cypereae; (2) define the limits of Fuireneae s.s., and (3) test the monophyly of Fuireneae s.l. genera with emphasis on Schoenoplectus and Schoenoplectiella. Using more than a third of Fuireneae s.l. diversity, our phylogenomic analyses strongly support six genera and four major Fuireneae s.l. clades that we recognise as tribes: Bolboschoeneae stat.nov., Fuireneae s.s., Schoenoplecteae, and Pseudoschoeneae tr.nov. These results are consistent with morphological, micromorphological (nutlet epidermal cell shape), and embryo differences detected for each tribe. At the generic level, most sub‐Saharan African perennials currently treated in Schoenoplectus are transferred to Schoenoplectiella. Our targeted sequencing results show that these species are nested in Schoenoplectiella, and their treatment here is consistent with micromorphological and embryo characters shared by all Schoenoplectiella species. Keys to recognised tribes and genera are provided.}},
  author       = {{Starr, Julian R. and Jiménez‐Mejías, Pedro and Zuntini, Alexandre R. and Léveillé‐Bourret, Étienne and Semmouri, Ilias and Muasya, Muthama and Baker, William J. and Brewer, Grace E. and Epitawalage, Niroshini and Fairlie, Isabel and Forest, Félix and Sabino Kikuchi, Izai A.B. and Pokorny, Lisa and Larridon, Isabel}},
  issn         = {{1674-4918}},
  journal      = {{JOURNAL OF SYSTEMATICS AND EVOLUTION}},
  keywords     = {{Plant Science,Ecology,Evolution,Behavior and Systematics,Angiosperms353,classification,Cyperaceae,Fuireneae,targeted sequencing,taxon limits,taxonomy}},
  language     = {{eng}},
  number       = {{4}},
  pages        = {{809--832}},
  title        = {{Targeted sequencing supports morphology and embryo features in resolving the classification of Cyperaceae tribe Fuireneae s.l.}},
  url          = {{http://dx.doi.org/10.1111/jse.12721}},
  volume       = {{59}},
  year         = {{2021}},
}
Altmetric
View in Altmetric
Web of Science
Times cited: