
Evidence for faster X chromosome evolution in spiders
- Author
- Jesper Bechsgaard, Mads Fristrup Schou, Bram Vanthournout (UGent) , Frederik Hendrickx (UGent) , Bjarne Knudsen, Virginia Settepani, Mikkel Heide Schierup and Trine Bilde
- Organization
- Abstract
- In species with chromosomal sex determination, X chromosomes are predicted to evolve faster than autosomes because of positive selection on recessive alleles or weak purifying selection. We investigated X chromosome evolution in Stegodyphus spiders that differ in mating system, sex ratio, and population dynamics. We assigned scaffolds to X chromosomes and autosomes using a novel method based on flow cytometry of sperm cells and reduced representation sequencing. We estimated coding substitution patterns (dN/dS) in a subsocial outcrossing species (S. africanus) and its social inbreeding and female-biased sister species (S. mimosarum), and found evidence for faster-X evolution in both species. X chromosome-to-autosome diversity (piX/piA) ratios were estimated in multiple populations. The average piX/ piA estimates of S. africanus (0.57 [95% CI: 0.55-0.60]) was lower than the neutral expectation of 0.75, consistent with more hitchhiking events on X-linked loci and/or a lower X chromosome mutation rate, and we provide evidence in support of both. The social species S. mimosarum has a significantly higher piX/piA ratio (0.72 [95% CI: 0.65-0.79]) in agreement with its female-biased sex ratio. Stegodyphus mimosarum also have different piX/piA estimates among populations, which we interpret as evidence for recurrent founder events. Simulations show that recurrent founder events are expected to decrease the piX/piA estimates in S. mimosarum, thus underestimating the true effect of female-biased sex ratios. Finally, we found lower synonymous divergence on X chromosomes in both species, and the male-tofemale substitution ratio to be higher than 1, indicating a higher mutation rate in males.
- Keywords
- Genetics, Ecology, Evolution, Behavior and Systematics, Molecular Biology, sex chromosome, social spider, faster-X, female bias, ADAPTIVE PROTEIN EVOLUTION, EFFECTIVE POPULATION-SIZE, MOLECULAR EVOLUTION, SEX-CHROMOSOMES, SOCIAL SPIDER, DELETERIOUS MUTATIONS, PHYLOGENETIC ANALYSIS, PURIFYING SELECTION, GENETIC DIVERSITY, DROSOPHILA
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Citation
Please use this url to cite or link to this publication: http://hdl.handle.net/1854/LU-8653338
- MLA
- Bechsgaard, Jesper, et al. “Evidence for Faster X Chromosome Evolution in Spiders.” MOLECULAR BIOLOGY AND EVOLUTION, edited by Amanda Larracuente, vol. 36, no. 6, 2019, pp. 1281–93.
- APA
- Bechsgaard, J., Schou, M. F., Vanthournout, B., Hendrickx, F., Knudsen, B., Settepani, V., … Bilde, T. (2019). Evidence for faster X chromosome evolution in spiders. MOLECULAR BIOLOGY AND EVOLUTION, 36(6), 1281–1293.
- Chicago author-date
- Bechsgaard, Jesper, Mads Fristrup Schou, Bram Vanthournout, Frederik Hendrickx, Bjarne Knudsen, Virginia Settepani, Mikkel Heide Schierup, and Trine Bilde. 2019. “Evidence for Faster X Chromosome Evolution in Spiders.” Edited by Amanda Larracuente. MOLECULAR BIOLOGY AND EVOLUTION 36 (6): 1281–93.
- Chicago author-date (all authors)
- Bechsgaard, Jesper, Mads Fristrup Schou, Bram Vanthournout, Frederik Hendrickx, Bjarne Knudsen, Virginia Settepani, Mikkel Heide Schierup, and Trine Bilde. 2019. “Evidence for Faster X Chromosome Evolution in Spiders.” Ed by. Amanda Larracuente. MOLECULAR BIOLOGY AND EVOLUTION 36 (6): 1281–1293.
- Vancouver
- 1.Bechsgaard J, Schou MF, Vanthournout B, Hendrickx F, Knudsen B, Settepani V, et al. Evidence for faster X chromosome evolution in spiders. Larracuente A, editor. MOLECULAR BIOLOGY AND EVOLUTION. 2019;36(6):1281–93.
- IEEE
- [1]J. Bechsgaard et al., “Evidence for faster X chromosome evolution in spiders,” MOLECULAR BIOLOGY AND EVOLUTION, vol. 36, no. 6, pp. 1281–1293, 2019.
@article{8653338, abstract = {In species with chromosomal sex determination, X chromosomes are predicted to evolve faster than autosomes because of positive selection on recessive alleles or weak purifying selection. We investigated X chromosome evolution in Stegodyphus spiders that differ in mating system, sex ratio, and population dynamics. We assigned scaffolds to X chromosomes and autosomes using a novel method based on flow cytometry of sperm cells and reduced representation sequencing. We estimated coding substitution patterns (dN/dS) in a subsocial outcrossing species (S. africanus) and its social inbreeding and female-biased sister species (S. mimosarum), and found evidence for faster-X evolution in both species. X chromosome-to-autosome diversity (piX/piA) ratios were estimated in multiple populations. The average piX/ piA estimates of S. africanus (0.57 [95% CI: 0.55-0.60]) was lower than the neutral expectation of 0.75, consistent with more hitchhiking events on X-linked loci and/or a lower X chromosome mutation rate, and we provide evidence in support of both. The social species S. mimosarum has a significantly higher piX/piA ratio (0.72 [95% CI: 0.65-0.79]) in agreement with its female-biased sex ratio. Stegodyphus mimosarum also have different piX/piA estimates among populations, which we interpret as evidence for recurrent founder events. Simulations show that recurrent founder events are expected to decrease the piX/piA estimates in S. mimosarum, thus underestimating the true effect of female-biased sex ratios. Finally, we found lower synonymous divergence on X chromosomes in both species, and the male-tofemale substitution ratio to be higher than 1, indicating a higher mutation rate in males.}, author = {Bechsgaard, Jesper and Schou, Mads Fristrup and Vanthournout, Bram and Hendrickx, Frederik and Knudsen, Bjarne and Settepani, Virginia and Schierup, Mikkel Heide and Bilde, Trine}, editor = {Larracuente, Amanda}, issn = {0737-4038}, journal = {MOLECULAR BIOLOGY AND EVOLUTION}, keywords = {Genetics,Ecology,Evolution,Behavior and Systematics,Molecular Biology,sex chromosome,social spider,faster-X,female bias,ADAPTIVE PROTEIN EVOLUTION,EFFECTIVE POPULATION-SIZE,MOLECULAR EVOLUTION,SEX-CHROMOSOMES,SOCIAL SPIDER,DELETERIOUS MUTATIONS,PHYLOGENETIC ANALYSIS,PURIFYING SELECTION,GENETIC DIVERSITY,DROSOPHILA}, language = {eng}, number = {6}, pages = {1281--1293}, title = {Evidence for faster X chromosome evolution in spiders}, url = {http://dx.doi.org/10.1093/molbev/msz074}, volume = {36}, year = {2019}, }
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