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The recent growth in the number of publicly available cancer omics databases has been accompanied by the development of various tools that allow researchers to visually explore these data. In 2015, we built MEXPRESS, an online tool for the integration and visualization of gene expression, DNA methylation and clinical data from The Cancer Genome Atlas (TCGA), a large collection of publicly available multi-omics cancer data. MEXPRESS addresses the need for an easy-to-use, interactive application that allows researchers to identify dysregulated genes and their clinical relevance in cancer. Furthermore, while other tools typically do not support integrated visualization of expression and DNA methylation data in combination with the precise genomic location of the methylation, MEXPRESS is unique in how it depicts these diverse data types together. Motivated by the large number of users MEXPRESS has managed to attract over the past 3 years and the recent migration of all TCGA data to a new data portal, we developed a new version of MEXPRESS (https://mexpress.be). It contains the latest TCGA data, additional types of omics and clinical data and extra functionality, allowing users to explore mechanisms of gene dysregulation beyond expression and DNA methylation.

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Please use this url to cite or link to this publication:

MLA
Koch, Alexander et al. “MEXPRESS Update 2019.” NUCLEIC ACIDS RESEARCH (2019): n. pag. Print.
APA
Koch, Alexander, Jeschke, J., Van Criekinge, W., van Engeland, M., & De Meyer, T. (2019). MEXPRESS update 2019. NUCLEIC ACIDS RESEARCH.
Chicago author-date
Koch, Alexander, Jana Jeschke, Wim Van Criekinge, Manon van Engeland, and Tim De Meyer. 2019. “MEXPRESS Update 2019.” Nucleic Acids Research.
Chicago author-date (all authors)
Koch, Alexander, Jana Jeschke, Wim Van Criekinge, Manon van Engeland, and Tim De Meyer. 2019. “MEXPRESS Update 2019.” Nucleic Acids Research.
Vancouver
1.
Koch A, Jeschke J, Van Criekinge W, van Engeland M, De Meyer T. MEXPRESS update 2019. NUCLEIC ACIDS RESEARCH. 2019;
IEEE
[1]
A. Koch, J. Jeschke, W. Van Criekinge, M. van Engeland, and T. De Meyer, “MEXPRESS update 2019,” NUCLEIC ACIDS RESEARCH, 2019.
@article{8617628,
  abstract     = {The recent growth in the number of publicly available cancer omics databases has been accompanied by the development of various tools that allow researchers to visually explore these data. In 2015, we built MEXPRESS, an online tool for the integration and visualization of gene expression, DNA methylation and clinical data from The Cancer Genome Atlas (TCGA), a large collection of publicly available multi-omics cancer data. MEXPRESS addresses the need for an easy-to-use, interactive application that allows researchers to identify dysregulated genes and their clinical relevance in cancer. Furthermore, while other tools typically do not support integrated visualization of expression and DNA methylation data in combination with the precise genomic location of the methylation, MEXPRESS is unique in how it depicts these diverse data types together. Motivated by the large number of users MEXPRESS has managed to attract over the past 3 years and the recent migration of all TCGA data to a new data portal, we developed a new version of MEXPRESS (https://mexpress.be). It contains the latest TCGA data, additional types of omics and clinical data and extra functionality, allowing users to explore mechanisms of gene dysregulation beyond expression and DNA methylation.},
  author       = {Koch, Alexander and Jeschke, Jana and Van Criekinge, Wim and van Engeland, Manon and De Meyer, Tim},
  issn         = {0305-1048},
  journal      = {NUCLEIC ACIDS RESEARCH},
  language     = {eng},
  title        = {MEXPRESS update 2019},
  url          = {http://dx.doi.org/10.1093/nar/gkz445},
  year         = {2019},
}

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