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Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer

(2017) NATURE GENETICS. 49(5). p.680-691
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Abstract
To identify common alleles associated with different histotypes of epithelial ovarian cancer (EOC), we pooled data from multiple genome-wide genotyping projects totaling 25,509 EOC cases and 40,941 controls. We identified nine new susceptibility loci for different EOC histotypes: six for serous EOC histotypes (3q28, 4q32.3, 8q21.11, 10q24.33, 18q11.2 and 22q12.1), two for mucinous EOC (3q22.3 and 9q31.1) and one for endometrioid EOC (5q12.3). We then performed meta-analysis on the results for high-grade serous ovarian cancer with the results from analysis of 31,448 BRCA1 and BRCA2 mutation carriers, including 3,887 mutation carriers with EOC. This identified three additional susceptibility loci at 2q13, 8q24.1 and 12q24.31. Integrated analyses of genes and regulatory biofeatures at each locus predicted candidate susceptibility genes, including OBFC1, a new candidate susceptibility gene for low-grade and borderline serous EOC.
Keywords
CLEAR-CELL CARCINOMA, BREAST-CANCER, COMMON VARIANTS, TELOMERE LENGTH, RISK, ASSOCIATION, ENDOMETRIOSIS, METAANALYSIS, POPULATION, MUTATIONS

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Chicago
Phelan, Catherine M, Karoline B Kuchenbaecker, Jonathan P Tyrer, Siddhartha P Kar, Kate Lawrenson, Stacey J Winham, Joe Dennis, et al. 2017. “Identification of 12 New Susceptibility Loci for Different Histotypes of Epithelial Ovarian Cancer.” Nature Genetics 49 (5): 680–691.
APA
Phelan, C. M., Kuchenbaecker, K. B., Tyrer, J. P., Kar, S. P., Lawrenson, K., Winham, S. J., Dennis, J., et al. (2017). Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer. NATURE GENETICS, 49(5), 680–691.
Vancouver
1.
Phelan CM, Kuchenbaecker KB, Tyrer JP, Kar SP, Lawrenson K, Winham SJ, et al. Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer. NATURE GENETICS. 2017;49(5):680–91.
MLA
Phelan, Catherine M, Karoline B Kuchenbaecker, Jonathan P Tyrer, et al. “Identification of 12 New Susceptibility Loci for Different Histotypes of Epithelial Ovarian Cancer.” NATURE GENETICS 49.5 (2017): 680–691. Print.
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  abstract     = {To identify common alleles associated with different histotypes of epithelial ovarian cancer (EOC), we pooled data from multiple genome-wide genotyping projects totaling 25,509 EOC cases and 40,941 controls. We identified nine new susceptibility loci for different EOC histotypes: six for serous EOC histotypes (3q28, 4q32.3, 8q21.11, 10q24.33, 18q11.2 and 22q12.1), two for mucinous EOC (3q22.3 and 9q31.1) and one for endometrioid EOC (5q12.3). We then performed meta-analysis on the results for high-grade serous ovarian cancer with the results from analysis of 31,448 BRCA1 and BRCA2 mutation carriers, including 3,887 mutation carriers with EOC. This identified three additional susceptibility loci at 2q13, 8q24.1 and 12q24.31. Integrated analyses of genes and regulatory biofeatures at each locus predicted candidate susceptibility genes, including OBFC1, a new candidate susceptibility gene for low-grade and borderline serous EOC.},
  author       = {Phelan, Catherine M and Kuchenbaecker, Karoline B and Tyrer, Jonathan P and Kar, Siddhartha P and Lawrenson, Kate and Winham, Stacey J and Dennis, Joe and Pirie, Ailith and Riggan, Marjorie J and Chornokur, Ganna and Earp, Madalene A and Lyra, Paulo C, Jr and Lee, Janet M and Coetzee, Simon and Beesley, Jonathan and McGuffog, Lesley and Soucy, Penny and Dicks, Ed and Lee, Andrew and Barrowdale, Daniel and Lecarpentier, Julie and Leslie, Goska and Aalfs, Cora M and Aben, Katja KH and Adams, Marcia and Adlard, Julian and Andrulis, Irene L and Anton-Culver, Hoda and Antonenkova, Natalia and Aravantinos, Gerasimos and Arnold, Norbert and Arun, Banu K and Arver, Brita and Azzollini, Jacopo and Balmana, Judith and Banerjee, Susana N and Barjhoux, Laure and Barkardottir, Rosa B and Bean, Yukie and Beckmann, Matthias W and Beeghly-Fadiel, Alicia and Benitez, Javier and Bermisheva, Marina and Bernardini, Marcus Q and Birrer, Michael J and Bjorge, Line and Black, Amanda and 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  issn         = {1061-4036},
  journal      = {NATURE GENETICS},
  keyword      = {CLEAR-CELL CARCINOMA,BREAST-CANCER,COMMON VARIANTS,TELOMERE LENGTH,RISK,ASSOCIATION,ENDOMETRIOSIS,METAANALYSIS,POPULATION,MUTATIONS},
  language     = {eng},
  number       = {5},
  pages        = {680--691},
  title        = {Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer},
  url          = {http://dx.doi.org/10.1038/ng.3826},
  volume       = {49},
  year         = {2017},
}

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