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Abstract
Strain EPL6(T), a Gram-negative, motile, short rod was isolated from a propanil and 3,4-dichloroaniline enrichment culture produced from rice paddy soil. Based on the analyses of the 16S rRNA gene sequence, strain EPL6(T) was observed to be a member of the family Comamonadaceae, sharing the highest pairwise identity with type strains of the species Alicycliphilus denitrificans K601(T) (96.8 %) and Melaminivora alkalimesophila CY1(T) (96.8 %). Strain EPL6(T) was able to grow in a temperature range of 15-37 degrees C, pH 6-9 and in the presence of up to 4% (w/v) NaCl and tested positive for catalase and oxidase reactions. The major respiratory quinone was Q8. The genomic DNA had a G+C content of 69.4 +/- 0.9 mol%. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and diphosphatidylglycerol, and the major fatty acid methyl esters comprised C-16 : 0, C-18 : 1 omega 7c and summed feature 3 (C-16 : 1 omega 7c/iso-C-15 : 0 2-OH). Comparison of the genome sequence of strain EPL6(T) and of its closest neighbours, Melaminivora alkalimesophila CY1(T) and Alicycliphilus denitrificans K601(T), yielded values of ANI <= 84.1% and of AAI <= 80.3 %. Therefore, the genetic, phylogenetic, phenotypic and chemotaxonomic characteristics support the classification of this organism into a new taxon. Considering the genetic divergence of strain EPL6(T) from the type strains of the closest species, which belong to distinct genera, we propose a new genus within the family Comamonadaceae, named Oryzisolibacter propanilivorax gen. nov., sp. nov., represented by the isolate EPL6(T) as the type strain of the species (=LMG 28427(T)=CECT 8927(T)).
Keywords
herbicide degrader, rice field soil, Comamonadaceae, new genus, COMAMONADACEAE, PROKARYOTES, STRAINS, ACID, SOIL

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Citation

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MLA
Vaz-Moreira, Ivone et al. “Oryzisolibacter Propanilivorax Gen. Nov., Sp. Nov., a Propanil-degrading Bacterium.” INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 67.10 (2017): 3752–3758. Print.
APA
Vaz-Moreira, I., Narciso-da-Rocha, C., Lopes, A. R., Carvalho, G., Lobo-da-Cunha, A., Whitman, W. B., Snauwaert, C., et al. (2017). Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 67(10), 3752–3758.
Chicago author-date
Vaz-Moreira, Ivone, Carlos Narciso-da-Rocha, Ana Rita Lopes, Gilda Carvalho, Alexandre Lobo-da-Cunha, William B Whitman, Cindy Snauwaert, Peter Vandamme, Célia M Manaia, and Olga C Nunes. 2017. “Oryzisolibacter Propanilivorax Gen. Nov., Sp. Nov., a Propanil-degrading Bacterium.” International Journal of Systematic and Evolutionary Microbiology 67 (10): 3752–3758.
Chicago author-date (all authors)
Vaz-Moreira, Ivone, Carlos Narciso-da-Rocha, Ana Rita Lopes, Gilda Carvalho, Alexandre Lobo-da-Cunha, William B Whitman, Cindy Snauwaert, Peter Vandamme, Célia M Manaia, and Olga C Nunes. 2017. “Oryzisolibacter Propanilivorax Gen. Nov., Sp. Nov., a Propanil-degrading Bacterium.” International Journal of Systematic and Evolutionary Microbiology 67 (10): 3752–3758.
Vancouver
1.
Vaz-Moreira I, Narciso-da-Rocha C, Lopes AR, Carvalho G, Lobo-da-Cunha A, Whitman WB, et al. Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 2017;67(10):3752–8.
IEEE
[1]
I. Vaz-Moreira et al., “Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium,” INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, vol. 67, no. 10, pp. 3752–3758, 2017.
@article{8548905,
  abstract     = {Strain EPL6(T), a Gram-negative, motile, short rod was isolated from a propanil and 3,4-dichloroaniline enrichment culture produced from rice paddy soil. Based on the analyses of the 16S rRNA gene sequence, strain EPL6(T) was observed to be a member of the family Comamonadaceae, sharing the highest pairwise identity with type strains of the species Alicycliphilus denitrificans K601(T) (96.8 %) and Melaminivora alkalimesophila CY1(T) (96.8 %). Strain EPL6(T) was able to grow in a temperature range of 15-37 degrees C, pH 6-9 and in the presence of up to 4% (w/v) NaCl and tested positive for catalase and oxidase reactions. The major respiratory quinone was Q8. The genomic DNA had a G+C content of 69.4 +/- 0.9 mol%. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and diphosphatidylglycerol, and the major fatty acid methyl esters comprised C-16 : 0, C-18 : 1 omega 7c and summed feature 3 (C-16 : 1 omega 7c/iso-C-15 : 0 2-OH). Comparison of the genome sequence of strain EPL6(T) and of its closest neighbours, Melaminivora alkalimesophila CY1(T) and Alicycliphilus denitrificans K601(T), yielded values of ANI <= 84.1% and of AAI <= 80.3 %. Therefore, the genetic, phylogenetic, phenotypic and chemotaxonomic characteristics support the classification of this organism into a new taxon. Considering the genetic divergence of strain EPL6(T) from the type strains of the closest species, which belong to distinct genera, we propose a new genus within the family Comamonadaceae, named Oryzisolibacter propanilivorax gen. nov., sp. nov., represented by the isolate EPL6(T) as the type strain of the species (=LMG 28427(T)=CECT 8927(T)).},
  author       = {Vaz-Moreira, Ivone and Narciso-da-Rocha, Carlos and Lopes, Ana Rita and Carvalho, Gilda and Lobo-da-Cunha, Alexandre and Whitman, William B and Snauwaert, Cindy and Vandamme, Peter and Manaia, Célia M and Nunes, Olga C},
  issn         = {1466-5026},
  journal      = {INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY},
  keywords     = {herbicide degrader,rice field soil,Comamonadaceae,new genus,COMAMONADACEAE,PROKARYOTES,STRAINS,ACID,SOIL},
  language     = {eng},
  number       = {10},
  pages        = {3752--3758},
  title        = {Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium},
  url          = {http://dx.doi.org/10.1099/ijsem.0.002184},
  volume       = {67},
  year         = {2017},
}

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