Ghent University Academic Bibliography

Advanced

A Cytoscape app for motif enumeration with ISMAGS

Thomas Van Parys UGent, Ine Melckenbeeck UGent, Maarten Houbraken UGent, Pieter Audenaert UGent, Didier Colle UGent, Mario Pickavet UGent, Piet Demeester UGent and Yves Van de Peer UGent (2017) BIOINFORMATICS. 33(3). p.461-463
abstract
We present a Cytoscape app for the ISMAGS algorithm, which can enumerate all instances of a motif in a graph, making optimal use of the motif's symmetries to make the search more efficient. The Cytoscape app provides a handy interface for this algorithm, which allows more efficient network analysis.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
keyword
IBCN
journal title
BIOINFORMATICS
volume
33
issue
3
pages
461 - 463
Web of Science id
000397260800027
ISSN
1367-4803
DOI
10.1093/bioinformatics/btw626
project
Bioinformatics: from nucleotids to networks (N2N)
language
English
UGent publication?
yes
classification
A1
id
8517123
handle
http://hdl.handle.net/1854/LU-8517123
date created
2017-04-06 09:03:32
date last changed
2017-05-04 09:42:01
@article{8517123,
  abstract     = {We present a Cytoscape app for the ISMAGS algorithm, which can enumerate all instances of a motif in a graph, making optimal use of the motif's symmetries to make the search more efficient. The Cytoscape app provides a handy interface for this algorithm, which allows more efficient network analysis.},
  author       = {Van Parys, Thomas and Melckenbeeck, Ine and Houbraken, Maarten and Audenaert, Pieter and Colle, Didier and Pickavet, Mario and Demeester, Piet and Van de Peer, Yves},
  issn         = {1367-4803},
  journal      = {BIOINFORMATICS},
  keyword      = {IBCN},
  language     = {eng},
  number       = {3},
  pages        = {461--463},
  title        = {A Cytoscape app for motif enumeration with ISMAGS},
  url          = {http://dx.doi.org/10.1093/bioinformatics/btw626},
  volume       = {33},
  year         = {2017},
}

Chicago
Van Parys, Thomas, Ine Melckenbeeck, Maarten Houbraken, Pieter Audenaert, Didier Colle, Mario Pickavet, Piet Demeester, and Yves Van de Peer. 2017. “A Cytoscape App for Motif Enumeration with ISMAGS.” Bioinformatics 33 (3): 461–463.
APA
Van Parys, T., Melckenbeeck, I., Houbraken, M., Audenaert, P., Colle, D., Pickavet, M., Demeester, P., et al. (2017). A Cytoscape app for motif enumeration with ISMAGS. BIOINFORMATICS, 33(3), 461–463.
Vancouver
1.
Van Parys T, Melckenbeeck I, Houbraken M, Audenaert P, Colle D, Pickavet M, et al. A Cytoscape app for motif enumeration with ISMAGS. BIOINFORMATICS. 2017;33(3):461–3.
MLA
Van Parys, Thomas, Ine Melckenbeeck, Maarten Houbraken, et al. “A Cytoscape App for Motif Enumeration with ISMAGS.” BIOINFORMATICS 33.3 (2017): 461–463. Print.