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Bioinformatics: from nucleotids to networks (N2N)
Abstract
The timing of fl owering is of prime importance for several agronomic traits, and its genetic control is therefore of great interest to breeders. Several signaling pathways converge on FLOWERING LOCUS T (FT) gene family members, which act as central regulators of fl owering, branching and seed dormancy. We identifi ed the complete FT gene family in the Lolium perenne genome and performed phylogenetic analysis to delineate functional clades and to identify putative functionally redundant paralogs. Five FT genes of L. perenne were selected for targeted resequencing in a genepool of 746 accessions to describe genetic diversity in wild accessions, commercial cultivars and breeding material.
Keywords
Flowering time, Gene family, FLOWERING LOCUS T, TERMINAL, FLOWER 1, Perennial ryegrass, Lolium perenne

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Citation

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Chicago
Veeckman, E, Klaas Vandepoele, T Asp, Isabel Roldàn-Ruiz, and Tom Ruttink. 2016. “Genomic Variation in the FT Gene Family of Perennial Ryegrass (Lolium Perenne).” In Breeding in a World of Scarcity : Proceedings of the 2015 Meeting of the Section “Forage Crops and Amenity Grasses” of Eucarpia, ed. Isabel Roldàn-Ruiz, Joost Baert, and Dirk Reheul, 121–126. Cham, Switzerland: Springer.
APA
Veeckman, E, Vandepoele, K., Asp, T., Roldàn-Ruiz, I., & Ruttink, T. (2016). Genomic variation in the FT gene family of perennial ryegrass (Lolium perenne). In I. Roldàn-Ruiz, J. Baert, & D. Reheul (Eds.), Breeding in a world of scarcity : proceedings of the 2015 meeting of the section “Forage Crops and Amenity Grasses” of Eucarpia (pp. 121–126). Presented at the 31st Symposium of Eucarpia’s “Forage Crops and Amenity Grasses” Section, Cham, Switzerland: Springer.
Vancouver
1.
Veeckman E, Vandepoele K, Asp T, Roldàn-Ruiz I, Ruttink T. Genomic variation in the FT gene family of perennial ryegrass (Lolium perenne). In: Roldàn-Ruiz I, Baert J, Reheul D, editors. Breeding in a world of scarcity : proceedings of the 2015 meeting of the section “Forage Crops and Amenity Grasses” of Eucarpia. Cham, Switzerland: Springer; 2016. p. 121–6.
MLA
Veeckman, E, Klaas Vandepoele, T Asp, et al. “Genomic Variation in the FT Gene Family of Perennial Ryegrass (Lolium Perenne).” Breeding in a World of Scarcity : Proceedings of the 2015 Meeting of the Section “Forage Crops and Amenity Grasses” of Eucarpia. Ed. Isabel Roldàn-Ruiz, Joost Baert, & Dirk Reheul. Cham, Switzerland: Springer, 2016. 121–126. Print.
@inproceedings{7777541,
  abstract     = {The timing of fl owering is of prime importance for several agronomic traits, and its genetic control is therefore of great interest to breeders. Several signaling pathways converge on FLOWERING LOCUS T (FT) gene family members, which act as central regulators of fl owering, branching and seed dormancy. We identifi ed the complete FT gene family in the Lolium perenne genome and performed phylogenetic analysis to delineate functional clades and to identify putative functionally redundant paralogs. Five FT genes of L. perenne were selected for targeted resequencing in a genepool of 746 accessions to describe genetic diversity in wild accessions, commercial cultivars and breeding material.},
  author       = {Veeckman, E and Vandepoele, Klaas and Asp, T and Rold{\`a}n-Ruiz, Isabel and Ruttink, Tom},
  booktitle    = {Breeding in a world of scarcity : proceedings of the 2015 meeting of the section 'Forage Crops and Amenity Grasses' of Eucarpia},
  editor       = {Rold{\`a}n-Ruiz, Isabel and Baert, Joost and Reheul, Dirk},
  isbn         = {9783319289304},
  keyword      = {Flowering time,Gene family,FLOWERING LOCUS T,TERMINAL,FLOWER 1,Perennial ryegrass,Lolium perenne},
  language     = {eng},
  location     = {Ghent, Belgium},
  pages        = {121--126},
  publisher    = {Springer},
  title        = {Genomic variation in the FT gene family of perennial ryegrass (Lolium perenne)},
  url          = {http://dx.doi.org/10.1007/978-3-319-28932-8\_18},
  year         = {2016},
}

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