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Unipept web services for metaproteomics analysis

Bart Mesuere UGent, Toon Willems, Felix Van der Jeugt UGent, Bart Devreese UGent, Peter Vandamme UGent and Peter Dawyndt UGent (2016) BIOINFORMATICS. 32(11). p.1746-1748
abstract
Summary: Unipept is an open source web application that is designed for metaproteomics analysis with a focus on interactive datavisualization. It is underpinned by a fast index built from UniProtKB and the NCBI taxonomy that enables quick retrieval of all UniProt entries in which a given tryptic peptide occurs. Unipept version 2.4 introduced web services that provide programmatic access to the metaproteomics analysis features. This enables integration of Unipept functionality in custom applications and data processing pipelines. Availability and implementation: The web services are freely available at http://api.unipept.ugent.be and are open sourced under the MIT license.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
subject
keyword
DATABASE
journal title
BIOINFORMATICS
Bioinformatics
volume
32
issue
11
pages
1746 - 1748
Web of Science type
Article
Web of Science id
000377428700020
JCR category
MATHEMATICAL & COMPUTATIONAL BIOLOGY
JCR impact factor
7.307 (2016)
JCR rank
2/57 (2016)
JCR quartile
1 (2016)
ISSN
1367-4803
DOI
10.1093/bioinformatics/btw039
project
HPC-UGent: the central High Performance Computing infrastructure of Ghent University
language
English
UGent publication?
yes
classification
A1
copyright statement
I have transferred the copyright for this publication to the publisher
id
7086405
handle
http://hdl.handle.net/1854/LU-7086405
date created
2016-02-16 09:05:44
date last changed
2016-12-19 15:47:12
@article{7086405,
  abstract     = {Summary: Unipept is an open source web application that is designed for metaproteomics analysis with a focus on interactive datavisualization. It is underpinned by a fast index built from UniProtKB and the NCBI taxonomy that enables quick retrieval of all UniProt entries in which a given tryptic peptide occurs. Unipept version 2.4 introduced web services that provide programmatic access to the metaproteomics analysis features. This enables integration of Unipept functionality in custom applications and data processing pipelines.
Availability and implementation: The web services are freely available at http://api.unipept.ugent.be and are open sourced under the MIT license.},
  author       = {Mesuere, Bart and Willems, Toon and Van der Jeugt, Felix and Devreese, Bart and Vandamme, Peter and Dawyndt, Peter},
  issn         = {1367-4803},
  journal      = {BIOINFORMATICS},
  keyword      = {DATABASE},
  language     = {eng},
  number       = {11},
  pages        = {1746--1748},
  title        = {Unipept web services for metaproteomics analysis},
  url          = {http://dx.doi.org/10.1093/bioinformatics/btw039},
  volume       = {32},
  year         = {2016},
}

Chicago
Mesuere, Bart, Toon Willems, Felix Van der Jeugt, Bart Devreese, Peter Vandamme, and Peter Dawyndt. 2016. “Unipept Web Services for Metaproteomics Analysis.” Bioinformatics 32 (11): 1746–1748.
APA
Mesuere, B., Willems, T., Van der Jeugt, F., Devreese, B., Vandamme, P., & Dawyndt, P. (2016). Unipept web services for metaproteomics analysis. BIOINFORMATICS, 32(11), 1746–1748.
Vancouver
1.
Mesuere B, Willems T, Van der Jeugt F, Devreese B, Vandamme P, Dawyndt P. Unipept web services for metaproteomics analysis. BIOINFORMATICS. 2016;32(11):1746–8.
MLA
Mesuere, Bart, Toon Willems, Felix Van der Jeugt, et al. “Unipept Web Services for Metaproteomics Analysis.” BIOINFORMATICS 32.11 (2016): 1746–1748. Print.