Advanced search
1 file | 77.83 KB Add to list

Unipept web services for metaproteomics analysis

Bart Mesuere (UGent) , Toon Willems, Felix Van der Jeugt (UGent) , Bart Devreese (UGent) , Peter Vandamme (UGent) and Peter Dawyndt (UGent)
(2016) BIOINFORMATICS. 32(11). p.1746-1748
Author
Organization
Project
Abstract
Summary: Unipept is an open source web application that is designed for metaproteomics analysis with a focus on interactive datavisualization. It is underpinned by a fast index built from UniProtKB and the NCBI taxonomy that enables quick retrieval of all UniProt entries in which a given tryptic peptide occurs. Unipept version 2.4 introduced web services that provide programmatic access to the metaproteomics analysis features. This enables integration of Unipept functionality in custom applications and data processing pipelines. Availability and implementation: The web services are freely available at http://api.unipept.ugent.be and are open sourced under the MIT license.
Keywords
DATABASE

Downloads

  • (...).pdf
    • full text
    • |
    • UGent only
    • |
    • PDF
    • |
    • 77.83 KB

Citation

Please use this url to cite or link to this publication:

MLA
Mesuere, Bart, et al. “Unipept Web Services for Metaproteomics Analysis.” BIOINFORMATICS, vol. 32, no. 11, 2016, pp. 1746–48, doi:10.1093/bioinformatics/btw039.
APA
Mesuere, B., Willems, T., Van der Jeugt, F., Devreese, B., Vandamme, P., & Dawyndt, P. (2016). Unipept web services for metaproteomics analysis. BIOINFORMATICS, 32(11), 1746–1748. https://doi.org/10.1093/bioinformatics/btw039
Chicago author-date
Mesuere, Bart, Toon Willems, Felix Van der Jeugt, Bart Devreese, Peter Vandamme, and Peter Dawyndt. 2016. “Unipept Web Services for Metaproteomics Analysis.” BIOINFORMATICS 32 (11): 1746–48. https://doi.org/10.1093/bioinformatics/btw039.
Chicago author-date (all authors)
Mesuere, Bart, Toon Willems, Felix Van der Jeugt, Bart Devreese, Peter Vandamme, and Peter Dawyndt. 2016. “Unipept Web Services for Metaproteomics Analysis.” BIOINFORMATICS 32 (11): 1746–1748. doi:10.1093/bioinformatics/btw039.
Vancouver
1.
Mesuere B, Willems T, Van der Jeugt F, Devreese B, Vandamme P, Dawyndt P. Unipept web services for metaproteomics analysis. BIOINFORMATICS. 2016;32(11):1746–8.
IEEE
[1]
B. Mesuere, T. Willems, F. Van der Jeugt, B. Devreese, P. Vandamme, and P. Dawyndt, “Unipept web services for metaproteomics analysis,” BIOINFORMATICS, vol. 32, no. 11, pp. 1746–1748, 2016.
@article{7086405,
  abstract     = {{Summary: Unipept is an open source web application that is designed for metaproteomics analysis with a focus on interactive datavisualization. It is underpinned by a fast index built from UniProtKB and the NCBI taxonomy that enables quick retrieval of all UniProt entries in which a given tryptic peptide occurs. Unipept version 2.4 introduced web services that provide programmatic access to the metaproteomics analysis features. This enables integration of Unipept functionality in custom applications and data processing pipelines.
Availability and implementation: The web services are freely available at http://api.unipept.ugent.be and are open sourced under the MIT license.}},
  author       = {{Mesuere, Bart and Willems, Toon and Van der Jeugt, Felix and Devreese, Bart and Vandamme, Peter and Dawyndt, Peter}},
  issn         = {{1367-4803}},
  journal      = {{BIOINFORMATICS}},
  keywords     = {{DATABASE}},
  language     = {{eng}},
  number       = {{11}},
  pages        = {{1746--1748}},
  title        = {{Unipept web services for metaproteomics analysis}},
  url          = {{http://dx.doi.org/10.1093/bioinformatics/btw039}},
  volume       = {{32}},
  year         = {{2016}},
}

Altmetric
View in Altmetric
Web of Science
Times cited: