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The Unipept metaproteomics analysis pipeline

Bart Mesuere UGent, Griet Debyser, Maarten Aerts, Bart Devreese UGent, Peter Vandamme UGent and Peter Dawyndt UGent (2015) PROTEOMICS. 15(8). p.1437-1442
abstract
Unipept (http://unipept.ugent.be) is a web application that offers a user-friendly way to explore the biodiversity of complex metaproteome samples by providing interactive visualizations. In this article, the updates and changes to Unipept since its initial release are presented. This includes the addition of interactive sunburst and treeview visualizations to the multipeptide analysis, the foundations of an application programming interface (API) and a command line interface, updated data sources, and the open-sourcing of the entire application under the MIT license.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
subject
keyword
Tryptic peptides, Metaproteomics, Biodiversity analysis, Bioinformatics, Data visualization, DATABASE, SEQUENCES
journal title
PROTEOMICS
Proteomics
volume
15
issue
8
issue title
Proteomics data visualisation
pages
1437 - 1442
Web of Science type
Article
Web of Science id
000352716000010
JCR category
BIOCHEMICAL RESEARCH METHODS
JCR impact factor
4.079 (2015)
JCR rank
13/77 (2015)
JCR quartile
1 (2015)
ISSN
1615-9853
DOI
10.1002/pmic.201400361
language
English
UGent publication?
yes
classification
A1
copyright statement
I have transferred the copyright for this publication to the publisher
id
5917705
handle
http://hdl.handle.net/1854/LU-5917705
date created
2015-03-31 08:36:25
date last changed
2016-12-19 15:43:17
@article{5917705,
  abstract     = {Unipept (http://unipept.ugent.be) is a web application that offers a user-friendly way to explore the biodiversity of complex metaproteome samples by providing interactive visualizations. In this article, the updates and changes to Unipept since its initial release are presented. This includes the addition of interactive sunburst and treeview visualizations to the multipeptide analysis, the foundations of an application programming interface (API) and a command line interface, updated data sources, and the open-sourcing of the entire application under the MIT license.},
  author       = {Mesuere, Bart and Debyser, Griet and Aerts, Maarten and Devreese, Bart and Vandamme, Peter and Dawyndt, Peter},
  issn         = {1615-9853},
  journal      = {PROTEOMICS},
  keyword      = {Tryptic peptides,Metaproteomics,Biodiversity analysis,Bioinformatics,Data visualization,DATABASE,SEQUENCES},
  language     = {eng},
  number       = {8},
  pages        = {1437--1442},
  title        = {The Unipept metaproteomics analysis pipeline},
  url          = {http://dx.doi.org/10.1002/pmic.201400361},
  volume       = {15},
  year         = {2015},
}

Chicago
Mesuere, Bart, Griet Debyser, Maarten Aerts, Bart Devreese, Peter Vandamme, and Peter Dawyndt. 2015. “The Unipept Metaproteomics Analysis Pipeline.” Proteomics 15 (8): 1437–1442.
APA
Mesuere, B., Debyser, G., Aerts, M., Devreese, B., Vandamme, P., & Dawyndt, P. (2015). The Unipept metaproteomics analysis pipeline. PROTEOMICS, 15(8), 1437–1442.
Vancouver
1.
Mesuere B, Debyser G, Aerts M, Devreese B, Vandamme P, Dawyndt P. The Unipept metaproteomics analysis pipeline. PROTEOMICS. 2015;15(8):1437–42.
MLA
Mesuere, Bart, Griet Debyser, Maarten Aerts, et al. “The Unipept Metaproteomics Analysis Pipeline.” PROTEOMICS 15.8 (2015): 1437–1442. Print.