Academic Bibliography

 Search 200 years of publications by Ghent University researchers.
Advanced search
1 file | 1.00 MB
Add to list
  1. Search results
  2. Genetic diversity analysis of Morocca...

Genetic diversity analysis of Moroccan lentil (Lens culinaris Medik.) landraces using Simple Sequence Repeat and Amplified Fragment Length Polymorphisms reveals functional adaptation towards agro-environmental origins

Omar Idrissi (UGent) , Sripada M Udupa, Chafika Houasli, Ellen De Keyser, Patrick Van Damme (UGent) and Jan De Riek
(2015) PLANT BREEDING. 134(3). p.322-332
Author
Organization
Abstract
In the absence of previous molecular characterization, we assessed genetic diversity of 53 Moroccan lentil landraces including two local cultivars using simple sequence repeat (SSR) and amplified fragment length polymorphisms (AFLP). Nineteen SSRs yielded 213 alleles, and seven AFLP primer combinations gave 766 fragments of which 422 were polymorphic. Moderate to high genetic variation was observed. Several small groups of landraces were differentiated. Interestingly, one of the smallest groups contained short-cycle landraces with high early vegetative growth. Landraces in that group were from the dry land location of Abda, where they were likely selected for adaptation to drought and heat stress over centuries. Another group contained two landraces from highland areas that may have been selected for specific adaptation to cold stress. A third group contained one landrace from the Zear region known for its seed quality and has been proposed for the protected designation of origin (PDO) quality mark. Both techniques gave evidence of differentiation of the latter landrace supporting the idea of PDO attribution. Functional grouping according to agro-environmental origins, cycle duration and early vegetative vigour was observed.
Keywords
SSR, genetic diversity, AFLP, agro-environmental origins, functional adaptation, POPULATION-STRUCTURE, MOLECULAR MARKERS, AFLP, COLLECTION, TRAITS, MICROSATELLITE, DOMESTICATION, TEMPERATURE, RESOURCES, WILD

Downloads

  • Download
    (...).pdf
    • full text
    • |
    • UGent only
    • |
    • PDF
    • |
    • 1.00 MB

Citation

Please use this url to cite or link to this publication:

MLA
Idrissi, Omar, et al. “Genetic Diversity Analysis of Moroccan Lentil (Lens Culinaris Medik.) Landraces Using Simple Sequence Repeat and Amplified Fragment Length Polymorphisms Reveals Functional Adaptation towards Agro-Environmental Origins.” PLANT BREEDING, vol. 134, no. 3, 2015, pp. 322–32, doi:10.1111/pbr.12261.
APA
Idrissi, O., Udupa, S. M., Houasli, C., De Keyser, E., Van Damme, P., & De Riek, J. (2015). Genetic diversity analysis of Moroccan lentil (Lens culinaris Medik.) landraces using Simple Sequence Repeat and Amplified Fragment Length Polymorphisms reveals functional adaptation towards agro-environmental origins. PLANT BREEDING, 134(3), 322–332. https://doi.org/10.1111/pbr.12261
Chicago author-date
Idrissi, Omar, Sripada M Udupa, Chafika Houasli, Ellen De Keyser, Patrick Van Damme, and Jan De Riek. 2015. “Genetic Diversity Analysis of Moroccan Lentil (Lens Culinaris Medik.) Landraces Using Simple Sequence Repeat and Amplified Fragment Length Polymorphisms Reveals Functional Adaptation towards Agro-Environmental Origins.” PLANT BREEDING 134 (3): 322–32. https://doi.org/10.1111/pbr.12261.
Chicago author-date (all authors)
Idrissi, Omar, Sripada M Udupa, Chafika Houasli, Ellen De Keyser, Patrick Van Damme, and Jan De Riek. 2015. “Genetic Diversity Analysis of Moroccan Lentil (Lens Culinaris Medik.) Landraces Using Simple Sequence Repeat and Amplified Fragment Length Polymorphisms Reveals Functional Adaptation towards Agro-Environmental Origins.” PLANT BREEDING 134 (3): 322–332. doi:10.1111/pbr.12261.
Vancouver
1.
Idrissi O, Udupa SM, Houasli C, De Keyser E, Van Damme P, De Riek J. Genetic diversity analysis of Moroccan lentil (Lens culinaris Medik.) landraces using Simple Sequence Repeat and Amplified Fragment Length Polymorphisms reveals functional adaptation towards agro-environmental origins. PLANT BREEDING. 2015;134(3):322–32.
IEEE
[1]
O. Idrissi, S. M. Udupa, C. Houasli, E. De Keyser, P. Van Damme, and J. De Riek, “Genetic diversity analysis of Moroccan lentil (Lens culinaris Medik.) landraces using Simple Sequence Repeat and Amplified Fragment Length Polymorphisms reveals functional adaptation towards agro-environmental origins,” PLANT BREEDING, vol. 134, no. 3, pp. 322–332, 2015.
@article{5909099,
  abstract     = {{In the absence of previous molecular characterization, we assessed genetic diversity of 53 Moroccan lentil landraces including two local cultivars using simple sequence repeat (SSR) and amplified fragment length polymorphisms (AFLP). Nineteen SSRs yielded 213 alleles, and seven AFLP primer combinations gave 766 fragments of which 422 were polymorphic. Moderate to high genetic variation was observed. Several small groups of landraces were differentiated. Interestingly, one of the smallest groups contained short-cycle landraces with high early vegetative growth. Landraces in that group were from the dry land location of Abda, where they were likely selected for adaptation to drought and heat stress over centuries. Another group contained two landraces from highland areas that may have been selected for specific adaptation to cold stress. A third group contained one landrace from the Zear region known for its seed quality and has been proposed for the protected designation of origin (PDO) quality mark. Both techniques gave evidence of differentiation of the latter landrace supporting the idea of PDO attribution. Functional grouping according to agro-environmental origins, cycle duration and early vegetative vigour was observed.}},
  author       = {{Idrissi, Omar and Udupa, Sripada M and Houasli, Chafika and De Keyser, Ellen and Van Damme, Patrick and De Riek, Jan}},
  issn         = {{0179-9541}},
  journal      = {{PLANT BREEDING}},
  keywords     = {{SSR,genetic diversity,AFLP,agro-environmental origins,functional adaptation,POPULATION-STRUCTURE,MOLECULAR MARKERS,AFLP,COLLECTION,TRAITS,MICROSATELLITE,DOMESTICATION,TEMPERATURE,RESOURCES,WILD}},
  language     = {{eng}},
  number       = {{3}},
  pages        = {{322--332}},
  title        = {{Genetic diversity analysis of Moroccan lentil (Lens culinaris Medik.) landraces using Simple Sequence Repeat and Amplified Fragment Length Polymorphisms reveals functional adaptation towards agro-environmental origins}},
  url          = {{http://doi.org/10.1111/pbr.12261}},
  volume       = {{134}},
  year         = {{2015}},
}
Altmetric
View in Altmetric
Web of Science
Times cited: