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Genome sequence of Ensifer arboris strain LMG 14919T: a microsymbiont of the legume Prosopis chilensis growing in Kosti, Sudan

Wayne Gerald Reeve, Rui Tian, Lambert Bräu, Lynne Goodwin, Christine Munk, Chris Detter, Roxanne Tapia, Cliff Han, Konstantinos Liolios, Marcel Huntemann, et al. (2014) STANDARDS IN GENOMIC SCIENCES. 9(3). p.473-483
abstract
Ensifer arboris LMG 14919T is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of several species of legume trees. LMG 14919T was isolated in 1987 from a nodule recovered from the roots of the tree Prosopis chilensis growing in Kosti, Sudan. LMG 14919T is highly effective at fixing nitrogen with P. chilensis (Chilean mesquite) and Acacia senegal (gum Arabic tree or gum acacia). LMG 14919T does not nodulate the tree Leucena leucocephala, nor the herbaceous species Macroptilium atropurpureum, Trifolium pratense, Medicago sativa, Lotus corniculatus and Galega orientalis. Here we describe the features of E. arboris LMG 14919T, together with genome sequence information and its annotation. The 6,850,303 bp high-quality-draft genome is arranged into 7 scaffolds of 12 contigs containing 6,461 protein-coding genes and 84 RNA-only encoding genes, and is one of 100 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
subject
keyword
LEGUMINOUS TREES, rhizobia, RNA GENES, SP-NOV, BACTERIA, ANNOTATION, PREDICTION, MELILOTI, DATABASE, SYSTEM, SOIL, nitrogen fixation, root-nodule bacteria, Alphaproteobacteria
journal title
STANDARDS IN GENOMIC SCIENCES
Stand. Genomic Sci.
volume
9
issue
3
pages
473 - 483
Web of Science type
Article
Web of Science id
000338995000052
ISSN
1944-3277
DOI
10.4056/sigs.4828625
language
English
UGent publication?
yes
classification
A1
copyright statement
I have retained and own the full copyright for this publication
id
5646114
handle
http://hdl.handle.net/1854/LU-5646114
date created
2014-07-09 19:27:06
date last changed
2017-05-19 09:39:16
@article{5646114,
  abstract     = {Ensifer arboris LMG 14919T is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of several species of legume trees. LMG 14919T was isolated in 1987 from a nodule recovered from the roots of the tree Prosopis chilensis growing in Kosti, Sudan. LMG 14919T is highly effective at fixing nitrogen with P. chilensis (Chilean mesquite) and Acacia senegal (gum Arabic tree or gum acacia). LMG 14919T does not nodulate the tree Leucena leucocephala, nor the herbaceous species Macroptilium atropurpureum, Trifolium pratense, Medicago sativa, Lotus corniculatus and Galega orientalis. Here we describe the features of E. arboris LMG 14919T, together with genome sequence information and its annotation. The 6,850,303 bp high-quality-draft genome is arranged into 7 scaffolds of 12 contigs containing 6,461 protein-coding genes and 84 RNA-only encoding genes, and is one of 100 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project.},
  author       = {Reeve, Wayne Gerald and Tian, Rui and Br{\"a}u, Lambert and Goodwin, Lynne and Munk, Christine and Detter, Chris and Tapia, Roxanne and Han, Cliff and Liolios, Konstantinos and Huntemann, Marcel and Pati, Amrita and Woyke, Tanja and Mavrommatis, Konstantinos and Markowitz, Victor and Ivanova, Natalia and Kyrpides, Nikos and Willems, Anne},
  issn         = {1944-3277},
  journal      = {STANDARDS IN GENOMIC SCIENCES},
  keyword      = {LEGUMINOUS TREES,rhizobia,RNA GENES,SP-NOV,BACTERIA,ANNOTATION,PREDICTION,MELILOTI,DATABASE,SYSTEM,SOIL,nitrogen fixation,root-nodule bacteria,Alphaproteobacteria},
  language     = {eng},
  number       = {3},
  pages        = {473--483},
  title        = {Genome sequence of Ensifer arboris strain LMG 14919T: a microsymbiont of the legume Prosopis chilensis growing in Kosti, Sudan},
  url          = {http://dx.doi.org/10.4056/sigs.4828625},
  volume       = {9},
  year         = {2014},
}

Chicago
Reeve, Wayne Gerald, Rui Tian, Lambert Bräu, Lynne Goodwin, Christine Munk, Chris Detter, Roxanne Tapia, et al. 2014. “Genome Sequence of Ensifer Arboris Strain LMG 14919T: a Microsymbiont of the Legume Prosopis Chilensis Growing in Kosti, Sudan.” Standards in Genomic Sciences 9 (3): 473–483.
APA
Reeve, W. G., Tian, R., Bräu, L., Goodwin, L., Munk, C., Detter, C., Tapia, R., et al. (2014). Genome sequence of Ensifer arboris strain LMG 14919T: a microsymbiont of the legume Prosopis chilensis growing in Kosti, Sudan. STANDARDS IN GENOMIC SCIENCES, 9(3), 473–483.
Vancouver
1.
Reeve WG, Tian R, Bräu L, Goodwin L, Munk C, Detter C, et al. Genome sequence of Ensifer arboris strain LMG 14919T: a microsymbiont of the legume Prosopis chilensis growing in Kosti, Sudan. STANDARDS IN GENOMIC SCIENCES. 2014;9(3):473–83.
MLA
Reeve, Wayne Gerald, Rui Tian, Lambert Bräu, et al. “Genome Sequence of Ensifer Arboris Strain LMG 14919T: a Microsymbiont of the Legume Prosopis Chilensis Growing in Kosti, Sudan.” STANDARDS IN GENOMIC SCIENCES 9.3 (2014): 473–483. Print.