Ghent University Academic Bibliography

Advanced

A multi-locus time-calibrated phylogeny of the siphonous green algae

Heroen Verbruggen UGent, M Ashworth, ST LoDuca, Caroline Vlaeminck UGent, Ellen Cocquyt UGent, T Sauvage, FW Zechman, DS Littler, MM Littler, Frédérik Leliaert UGent, et al. (2009) MOLECULAR PHYLOGENETICS AND EVOLUTION. 50(3). p.642-653
abstract
The siphonous green algae are an assemblage of seaweeds that consist of a single giant cell. They comprise two sister orders, the Bryopsidales and Dasycladales. We infer the phylogenetic relationships among the siphonous green algae based on a five-locus data matrix and analyze temporal aspects of their diversification using relaxed molecular clock methods calibrated with the fossil record. The multi-locus approach resolves much of the previous phylogenetic uncertainty, but the radiation of families belonging to the core Halimedineae remains unresolved. In the Bryopsidales, three main clades were inferred, two of which correspond to previously described suborders (Bryopsidineae and Halimedineae) and a third lineage that contains only the limestone-boring genus Ostreobium. Relaxed molecular clock models indicate a Neoproterozoic origin of the siphonous green algae and a Paleozoic diversification of the orders into their families. The inferred node ages are used to resolve conflicting hypotheses about species ages in the tropical marine alga Halimeda.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
keyword
MAXIMUM-LIKELIHOOD, GENE-SEQUENCES, UDOTEACEAE BRYOPSIDALES, DASYCLADALES CHLOROPHYTA, HALIMEDA BRYOPSIDALES, Chlorophyta, Ulvophyceae, Dasycladales, Bryopsidales, Fossil algae, Molecular phylogenetics, Relaxed molecular clock, MOLECULAR-DATA, SOUTH CHINA, 18S RDNA, EVOLUTION, ULVOPHYCEAE
journal title
MOLECULAR PHYLOGENETICS AND EVOLUTION
Mol. Phylogenet. Evol.
volume
50
issue
3
pages
642 - 653
Web of Science type
Article
Web of Science id
000263882000020
JCR category
EVOLUTIONARY BIOLOGY
JCR impact factor
3.556 (2009)
JCR rank
14/44 (2009)
JCR quartile
2 (2009)
ISSN
1055-7903
DOI
10.1016/j.ympev.2008.12.018
language
English
UGent publication?
yes
classification
A1
id
535330
handle
http://hdl.handle.net/1854/LU-535330
date created
2009-03-31 13:29:43
date last changed
2016-12-19 15:42:49
@article{535330,
  abstract     = {The siphonous green algae are an assemblage of seaweeds that consist of a single giant cell. They comprise two sister orders, the Bryopsidales and Dasycladales. We infer the phylogenetic relationships among the siphonous green algae based on a five-locus data matrix and analyze temporal aspects of their diversification using relaxed molecular clock methods calibrated with the fossil record. The multi-locus approach resolves much of the previous phylogenetic uncertainty, but the radiation of families belonging to the core Halimedineae remains unresolved. In the Bryopsidales, three main clades were inferred, two of which correspond to previously described suborders (Bryopsidineae and Halimedineae) and a third lineage that contains only the limestone-boring genus Ostreobium. Relaxed molecular clock models indicate a Neoproterozoic origin of the siphonous green algae and a Paleozoic diversification of the orders into their families. The inferred node ages are used to resolve conflicting hypotheses about species ages in the tropical marine alga Halimeda.},
  author       = {Verbruggen, Heroen and Ashworth, M and LoDuca, ST and Vlaeminck, Caroline and Cocquyt, Ellen and Sauvage, T and Zechman, FW and Littler, DS and Littler, MM and Leliaert, Fr{\'e}d{\'e}rik and De Clerck, Olivier},
  issn         = {1055-7903},
  journal      = {MOLECULAR PHYLOGENETICS AND EVOLUTION},
  keyword      = {MAXIMUM-LIKELIHOOD,GENE-SEQUENCES,UDOTEACEAE BRYOPSIDALES,DASYCLADALES CHLOROPHYTA,HALIMEDA BRYOPSIDALES,Chlorophyta,Ulvophyceae,Dasycladales,Bryopsidales,Fossil algae,Molecular phylogenetics,Relaxed molecular clock,MOLECULAR-DATA,SOUTH CHINA,18S RDNA,EVOLUTION,ULVOPHYCEAE},
  language     = {eng},
  number       = {3},
  pages        = {642--653},
  title        = {A multi-locus time-calibrated phylogeny of the siphonous green algae},
  url          = {http://dx.doi.org/10.1016/j.ympev.2008.12.018},
  volume       = {50},
  year         = {2009},
}

Chicago
Verbruggen, Heroen, M Ashworth, ST LoDuca, Caroline Vlaeminck, Ellen Cocquyt, T Sauvage, FW Zechman, et al. 2009. “A Multi-locus Time-calibrated Phylogeny of the Siphonous Green Algae.” Molecular Phylogenetics and Evolution 50 (3): 642–653.
APA
Verbruggen, Heroen, Ashworth, M., LoDuca, S., Vlaeminck, C., Cocquyt, E., Sauvage, T., Zechman, F., et al. (2009). A multi-locus time-calibrated phylogeny of the siphonous green algae. MOLECULAR PHYLOGENETICS AND EVOLUTION, 50(3), 642–653.
Vancouver
1.
Verbruggen H, Ashworth M, LoDuca S, Vlaeminck C, Cocquyt E, Sauvage T, et al. A multi-locus time-calibrated phylogeny of the siphonous green algae. MOLECULAR PHYLOGENETICS AND EVOLUTION. 2009;50(3):642–53.
MLA
Verbruggen, Heroen, M Ashworth, ST LoDuca, et al. “A Multi-locus Time-calibrated Phylogeny of the Siphonous Green Algae.” MOLECULAR PHYLOGENETICS AND EVOLUTION 50.3 (2009): 642–653. Print.