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Echinimonas agarilytica gen. nov., sp. nov., a new gammaproteobacterium isolated from the sea urchin Strongylocentrotus intermedius

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Abstract
A novel Gram-negative, facultatively anaerobic and motile bacterial strain, designated KMM 6351(T), was isolated from the sea urchin Strongylocentrotus intermedius and examined using a polyphasic taxonomic approach. A phylogenetic analysis based on 16S rRNA gene sequencing revealed that the strain formed a distinct phyletic line in the class Gammaproteobacteria and was most closely related to the genera Aliivibrio, Photobacterium and Vibrio. Strain KMM 6351(T) grows at 4-40 A degrees C and with 0.5-12 % NaCl and decomposes aesculin, agar, gelatin, starch, chitin and DNA. The DNA G+C content of the strain was determined to be 46.1 mol%. The prevalent fatty acids were found to be C-16:0, C-18:1 omega 7c, C-12:0 3-OH and summed feature 3 (comprising C-16:1 omega 7c and/or iso-C-15:0 2-OH fatty acids). The major polar lipids were determined to be diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and an unidentified aminolipid. The predominant ubiquinone was found to be Q-8. The results of the phenotypic, chemotaxonomic and genotypic analyses clearly indicated that the novel strain should be assigned to a new genus and species within the class gamma-Proteobacteria for which the name Echinimonas agarilytica gen. nov., sp. nov. is proposed. The type strain is KMM 6351(T) (=KCTC 22996(T) = LMG 25420(T)).
Keywords
gamma-Proteobacteria, Echinimonas agarilytica gen. nov.sp nov., Marine bacteria, Phylogeny, Sea urchin Strongylocentrotus intermedius, PHYLOTYPES, ACID, BACTERIUM

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MLA
Nedashkovskaya, Olga I, Anna M Stenkova, Natalia V Zhukova, et al. “Echinimonas Agarilytica Gen. Nov., Sp. Nov., a New Gammaproteobacterium Isolated from the Sea Urchin Strongylocentrotus Intermedius.” ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY 103.1 (2013): 69–77. Print.
APA
Nedashkovskaya, O. I., Stenkova, A. M., Zhukova, N. V., Van Trappen, S., Lee, J.-S., & Kim, S. B. (2013). Echinimonas agarilytica gen. nov., sp. nov., a new gammaproteobacterium isolated from the sea urchin Strongylocentrotus intermedius. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 103(1), 69–77.
Chicago author-date
Nedashkovskaya, Olga I, Anna M Stenkova, Natalia V Zhukova, Stefanie Van Trappen, Jung-Sook Lee, and Seung Bum Kim. 2013. “Echinimonas Agarilytica Gen. Nov., Sp. Nov., a New Gammaproteobacterium Isolated from the Sea Urchin Strongylocentrotus Intermedius.” Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology 103 (1): 69–77.
Chicago author-date (all authors)
Nedashkovskaya, Olga I, Anna M Stenkova, Natalia V Zhukova, Stefanie Van Trappen, Jung-Sook Lee, and Seung Bum Kim. 2013. “Echinimonas Agarilytica Gen. Nov., Sp. Nov., a New Gammaproteobacterium Isolated from the Sea Urchin Strongylocentrotus Intermedius.” Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology 103 (1): 69–77.
Vancouver
1.
Nedashkovskaya OI, Stenkova AM, Zhukova NV, Van Trappen S, Lee J-S, Kim SB. Echinimonas agarilytica gen. nov., sp. nov., a new gammaproteobacterium isolated from the sea urchin Strongylocentrotus intermedius. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY. 2013;103(1):69–77.
IEEE
[1]
O. I. Nedashkovskaya, A. M. Stenkova, N. V. Zhukova, S. Van Trappen, J.-S. Lee, and S. B. Kim, “Echinimonas agarilytica gen. nov., sp. nov., a new gammaproteobacterium isolated from the sea urchin Strongylocentrotus intermedius,” ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, vol. 103, no. 1, pp. 69–77, 2013.
@article{4246102,
  abstract     = {A novel Gram-negative, facultatively anaerobic and motile bacterial strain, designated KMM 6351(T), was isolated from the sea urchin Strongylocentrotus intermedius and examined using a polyphasic taxonomic approach. A phylogenetic analysis based on 16S rRNA gene sequencing revealed that the strain formed a distinct phyletic line in the class Gammaproteobacteria and was most closely related to the genera Aliivibrio, Photobacterium and Vibrio. Strain KMM 6351(T) grows at 4-40 A degrees C and with 0.5-12 % NaCl and decomposes aesculin, agar, gelatin, starch, chitin and DNA. The DNA G+C content of the strain was determined to be 46.1 mol%. The prevalent fatty acids were found to be C-16:0, C-18:1 omega 7c, C-12:0 3-OH and summed feature 3 (comprising C-16:1 omega 7c and/or iso-C-15:0 2-OH fatty acids). The major polar lipids were determined to be diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and an unidentified aminolipid. The predominant ubiquinone was found to be Q-8. The results of the phenotypic, chemotaxonomic and genotypic analyses clearly indicated that the novel strain should be assigned to a new genus and species within the class gamma-Proteobacteria for which the name Echinimonas agarilytica gen. nov., sp. nov. is proposed. The type strain is KMM 6351(T) (=KCTC 22996(T) = LMG 25420(T)).},
  author       = {Nedashkovskaya, Olga I and Stenkova, Anna M and Zhukova, Natalia V and Van Trappen, Stefanie and Lee, Jung-Sook and Kim, Seung Bum},
  issn         = {0003-6072},
  journal      = {ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY},
  keywords     = {gamma-Proteobacteria,Echinimonas agarilytica gen. nov.sp nov.,Marine bacteria,Phylogeny,Sea urchin Strongylocentrotus intermedius,PHYLOTYPES,ACID,BACTERIUM},
  language     = {eng},
  number       = {1},
  pages        = {69--77},
  title        = {Echinimonas agarilytica gen. nov., sp. nov., a new gammaproteobacterium isolated from the sea urchin Strongylocentrotus intermedius},
  url          = {http://dx.doi.org/10.1007/s10482-012-9787-y},
  volume       = {103},
  year         = {2013},
}

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