Cell to whole-plant phenotyping: the best is yet to come
(2013) TRENDS IN PLANT SCIENCE. 18(8). p.433-444- abstract
- Imaging and image processing have revolutionized plant phenotyping and are now a major tool for phenotypic trait measurement. Here we review plant phenotyping systems by examining three important characteristics: throughput, dimensionality, and resolution. First, whole-plant phenotyping systems are highlighted together with advances in automation that enable significant throughput increases. Organ and cellular level phenotyping and its tools, often operating at a lower throughput, are then discussed as a means to obtain high-dimensional phenotypic data at elevated spatial and temporal resolution. The significance of recent developments in sensor technologies that give access to plant morphology and physiology-related traits is shown. Overall, attention is focused on spatial and temporal resolution because these are crucial aspects of imaging procedures in plant phenotyping systems.
Please use this url to cite or link to this publication:
http://hdl.handle.net/1854/LU-4143928
- author
- Stijn Dhondt UGent, Nathalie Wuyts and Dirk Inzé UGent
- organization
- year
- 2013
- type
- journalArticle (review)
- publication status
- published
- subject
- keyword
- ROOT-SYSTEM ARCHITECTURE, CHLOROPHYLL FLUORESCENCE, RAY COMPUTED TOMOGRAPHY, IMAGE ANALYSIS TOOL, ARABIDOPSIS THALIANA, LEAF GROWTH, QUANTITATIVE ANALYSIS, GENE EXPRESSION, AUTOMATIC QUANTIFICATION, WATER-DEFICIT
- journal title
- TRENDS IN PLANT SCIENCE
- Trends Plant Sci.
- volume
- 18
- issue
- 8
- pages
- 433 - 444
- Web of Science type
- Review
- Web of Science id
- 000323810000003
- JCR category
- PLANT SCIENCES
- JCR impact factor
- 13.479 (2013)
- JCR rank
- 2/199 (2013)
- JCR quartile
- 1 (2013)
- ISSN
- 1360-1385
- DOI
- 10.1016/j.tplants.2013.04.008
- project
- Biotechnology for a sustainable economy (Bio-Economy)
- language
- English
- UGent publication?
- yes
- classification
- A1
- copyright statement
- I have transferred the copyright for this publication to the publisher
- id
- 4143928
- handle
- http://hdl.handle.net/1854/LU-4143928
- date created
- 2013-09-24 14:43:52
- date last changed
- 2016-12-19 15:46:05
@article{4143928, abstract = {Imaging and image processing have revolutionized plant phenotyping and are now a major tool for phenotypic trait measurement. Here we review plant phenotyping systems by examining three important characteristics: throughput, dimensionality, and resolution. First, whole-plant phenotyping systems are highlighted together with advances in automation that enable significant throughput increases. Organ and cellular level phenotyping and its tools, often operating at a lower throughput, are then discussed as a means to obtain high-dimensional phenotypic data at elevated spatial and temporal resolution. The significance of recent developments in sensor technologies that give access to plant morphology and physiology-related traits is shown. Overall, attention is focused on spatial and temporal resolution because these are crucial aspects of imaging procedures in plant phenotyping systems.}, author = {Dhondt, Stijn and Wuyts, Nathalie and Inz{\'e}, Dirk}, issn = {1360-1385}, journal = {TRENDS IN PLANT SCIENCE}, keyword = {ROOT-SYSTEM ARCHITECTURE,CHLOROPHYLL FLUORESCENCE,RAY COMPUTED TOMOGRAPHY,IMAGE ANALYSIS TOOL,ARABIDOPSIS THALIANA,LEAF GROWTH,QUANTITATIVE ANALYSIS,GENE EXPRESSION,AUTOMATIC QUANTIFICATION,WATER-DEFICIT}, language = {eng}, number = {8}, pages = {433--444}, title = {Cell to whole-plant phenotyping: the best is yet to come}, url = {http://dx.doi.org/10.1016/j.tplants.2013.04.008}, volume = {18}, year = {2013}, }
- Chicago
- Dhondt, Stijn, Nathalie Wuyts, and Dirk Inzé. 2013. “Cell to Whole-plant Phenotyping: The Best Is yet to Come.” Trends in Plant Science 18 (8): 433–444.
- APA
- Dhondt, S., Wuyts, N., & Inzé, D. (2013). Cell to whole-plant phenotyping: the best is yet to come. TRENDS IN PLANT SCIENCE, 18(8), 433–444.
- Vancouver
- 1.Dhondt S, Wuyts N, Inzé D. Cell to whole-plant phenotyping: the best is yet to come. TRENDS IN PLANT SCIENCE. 2013;18(8):433–44.
- MLA
- Dhondt, Stijn, Nathalie Wuyts, and Dirk Inzé. “Cell to Whole-plant Phenotyping: The Best Is yet to Come.” TRENDS IN PLANT SCIENCE 18.8 (2013): 433–444. Print.