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Cell to whole-plant phenotyping: the best is yet to come

Stijn Dhondt UGent, Nathalie Wuyts and Dirk Inzé UGent (2013) TRENDS IN PLANT SCIENCE. 18(8). p.433-444
abstract
Imaging and image processing have revolutionized plant phenotyping and are now a major tool for phenotypic trait measurement. Here we review plant phenotyping systems by examining three important characteristics: throughput, dimensionality, and resolution. First, whole-plant phenotyping systems are highlighted together with advances in automation that enable significant throughput increases. Organ and cellular level phenotyping and its tools, often operating at a lower throughput, are then discussed as a means to obtain high-dimensional phenotypic data at elevated spatial and temporal resolution. The significance of recent developments in sensor technologies that give access to plant morphology and physiology-related traits is shown. Overall, attention is focused on spatial and temporal resolution because these are crucial aspects of imaging procedures in plant phenotyping systems.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (review)
publication status
published
subject
keyword
ROOT-SYSTEM ARCHITECTURE, CHLOROPHYLL FLUORESCENCE, RAY COMPUTED TOMOGRAPHY, IMAGE ANALYSIS TOOL, ARABIDOPSIS THALIANA, LEAF GROWTH, QUANTITATIVE ANALYSIS, GENE EXPRESSION, AUTOMATIC QUANTIFICATION, WATER-DEFICIT
journal title
TRENDS IN PLANT SCIENCE
Trends Plant Sci.
volume
18
issue
8
pages
433 - 444
Web of Science type
Review
Web of Science id
000323810000003
JCR category
PLANT SCIENCES
JCR impact factor
13.479 (2013)
JCR rank
2/199 (2013)
JCR quartile
1 (2013)
ISSN
1360-1385
DOI
10.1016/j.tplants.2013.04.008
project
Biotechnology for a sustainable economy (Bio-Economy)
language
English
UGent publication?
yes
classification
A1
copyright statement
I have transferred the copyright for this publication to the publisher
id
4143928
handle
http://hdl.handle.net/1854/LU-4143928
date created
2013-09-24 14:43:52
date last changed
2016-12-19 15:46:05
@article{4143928,
  abstract     = {Imaging and image processing have revolutionized plant phenotyping and are now a major tool for phenotypic trait measurement. Here we review plant phenotyping systems by examining three important characteristics: throughput, dimensionality, and resolution. First, whole-plant phenotyping systems are highlighted together with advances in automation that enable significant throughput increases. Organ and cellular level phenotyping and its tools, often operating at a lower throughput, are then discussed as a means to obtain high-dimensional phenotypic data at elevated spatial and temporal resolution. The significance of recent developments in sensor technologies that give access to plant morphology and physiology-related traits is shown. Overall, attention is focused on spatial and temporal resolution because these are crucial aspects of imaging procedures in plant phenotyping systems.},
  author       = {Dhondt, Stijn and Wuyts, Nathalie and Inz{\'e}, Dirk},
  issn         = {1360-1385},
  journal      = {TRENDS IN PLANT SCIENCE},
  keyword      = {ROOT-SYSTEM ARCHITECTURE,CHLOROPHYLL FLUORESCENCE,RAY COMPUTED TOMOGRAPHY,IMAGE ANALYSIS TOOL,ARABIDOPSIS THALIANA,LEAF GROWTH,QUANTITATIVE ANALYSIS,GENE EXPRESSION,AUTOMATIC QUANTIFICATION,WATER-DEFICIT},
  language     = {eng},
  number       = {8},
  pages        = {433--444},
  title        = {Cell to whole-plant phenotyping: the best is yet to come},
  url          = {http://dx.doi.org/10.1016/j.tplants.2013.04.008},
  volume       = {18},
  year         = {2013},
}
Chicago
Dhondt, Stijn, Nathalie Wuyts, and Dirk Inzé. 2013. “Cell to Whole-plant Phenotyping: The Best Is yet to Come.” Trends in Plant Science 18 (8): 433–444.
APA
Dhondt, S., Wuyts, N., & Inzé, D. (2013). Cell to whole-plant phenotyping: the best is yet to come. TRENDS IN PLANT SCIENCE, 18(8), 433–444.
Vancouver
1.
Dhondt S, Wuyts N, Inzé D. Cell to whole-plant phenotyping: the best is yet to come. TRENDS IN PLANT SCIENCE. 2013;18(8):433–44.
MLA
Dhondt, Stijn, Nathalie Wuyts, and Dirk Inzé. “Cell to Whole-plant Phenotyping: The Best Is yet to Come.” TRENDS IN PLANT SCIENCE 18.8 (2013): 433–444. Print.