Cell to whole-plant phenotyping: the best is yet to come
- Author
- Stijn Dhondt (UGent) , Nathalie Wuyts (UGent) and Dirk Inzé (UGent)
- Organization
- Project
- Biotechnology for a sustainable economy (Bio-Economy)
- Abstract
- Imaging and image processing have revolutionized plant phenotyping and are now a major tool for phenotypic trait measurement. Here we review plant phenotyping systems by examining three important characteristics: throughput, dimensionality, and resolution. First, whole-plant phenotyping systems are highlighted together with advances in automation that enable significant throughput increases. Organ and cellular level phenotyping and its tools, often operating at a lower throughput, are then discussed as a means to obtain high-dimensional phenotypic data at elevated spatial and temporal resolution. The significance of recent developments in sensor technologies that give access to plant morphology and physiology-related traits is shown. Overall, attention is focused on spatial and temporal resolution because these are crucial aspects of imaging procedures in plant phenotyping systems.
- Keywords
- ROOT-SYSTEM ARCHITECTURE, CHLOROPHYLL FLUORESCENCE, RAY COMPUTED TOMOGRAPHY, IMAGE ANALYSIS TOOL, ARABIDOPSIS THALIANA, LEAF GROWTH, QUANTITATIVE ANALYSIS, GENE EXPRESSION, AUTOMATIC QUANTIFICATION, WATER-DEFICIT
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Citation
Please use this url to cite or link to this publication: http://hdl.handle.net/1854/LU-4143928
- Chicago
- Dhondt, Stijn, Nathalie Wuyts, and Dirk Inzé. 2013. “Cell to Whole-plant Phenotyping: The Best Is yet to Come.” Trends in Plant Science 18 (8): 433–444.
- APA
- Dhondt, S., Wuyts, N., & Inzé, D. (2013). Cell to whole-plant phenotyping: the best is yet to come. TRENDS IN PLANT SCIENCE, 18(8), 433–444.
- Vancouver
- 1.Dhondt S, Wuyts N, Inzé D. Cell to whole-plant phenotyping: the best is yet to come. TRENDS IN PLANT SCIENCE. 2013;18(8):433–44.
- MLA
- Dhondt, Stijn, Nathalie Wuyts, and Dirk Inzé. “Cell to Whole-plant Phenotyping: The Best Is yet to Come.” TRENDS IN PLANT SCIENCE 18.8 (2013): 433–444. Print.
@article{4143928,
abstract = {Imaging and image processing have revolutionized plant phenotyping and are now a major tool for phenotypic trait measurement. Here we review plant phenotyping systems by examining three important characteristics: throughput, dimensionality, and resolution. First, whole-plant phenotyping systems are highlighted together with advances in automation that enable significant throughput increases. Organ and cellular level phenotyping and its tools, often operating at a lower throughput, are then discussed as a means to obtain high-dimensional phenotypic data at elevated spatial and temporal resolution. The significance of recent developments in sensor technologies that give access to plant morphology and physiology-related traits is shown. Overall, attention is focused on spatial and temporal resolution because these are crucial aspects of imaging procedures in plant phenotyping systems.},
author = {Dhondt, Stijn and Wuyts, Nathalie and Inz{\'e}, Dirk},
issn = {1360-1385},
journal = {TRENDS IN PLANT SCIENCE},
keyword = {ROOT-SYSTEM ARCHITECTURE,CHLOROPHYLL FLUORESCENCE,RAY COMPUTED TOMOGRAPHY,IMAGE ANALYSIS TOOL,ARABIDOPSIS THALIANA,LEAF GROWTH,QUANTITATIVE ANALYSIS,GENE EXPRESSION,AUTOMATIC QUANTIFICATION,WATER-DEFICIT},
language = {eng},
number = {8},
pages = {433--444},
title = {Cell to whole-plant phenotyping: the best is yet to come},
url = {http://dx.doi.org/10.1016/j.tplants.2013.04.008},
volume = {18},
year = {2013},
}
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