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Exploration of jasmonate signalling via automated and standardized transient expression assays in tobacco cells

Valerie De Sutter, Rudy Vanderhaeghen (UGent) , Sofie Tilleman (UGent) , Freya Lammertyn (UGent) , Isabelle Vanhoutte (UGent) , Mansour Karimi (UGent) , Dirk Inzé (UGent) , Alain Goossens (UGent) and Pierre Hilson (UGent)
(2005) PLANT JOURNAL. 44(6). p.1065-1076
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Abstract
Although sequence information and genome annotation are improving at an impressive pace, functional ontology is still non-existent or rudimentary for most genes. In this regard, transient expression assays are very valuable for identification of short functional segments in particular pathways, because they can be performed rapidly and at a scale unattainable in stably transformed tissues. Vectors were constructed and protocols developed for systematic transient assays in plant protoplasts. To enhance throughput and reproducibility, protoplast treatments were performed entirely by a liquid-handling robot in multiwell plates, including polyethylene glycol/Ca2+ cell transfection with plasmid mixtures, washes and lysis. All transcriptional readouts were measured using a dual firefly/Renilla luciferase assay, in which the former was controlled by a reporter promoter and the latter by the 35S CaMV promoter, which served as internal normalization standard. The automated protocols were suitable for transient assays in protoplasts prepared from cell cultures of Nicotiana tabacum Bright Yellow-2 and Arabidopsis thaliana. They were implemented in a screen to discover potential regulators of genes coding for key enzymes in nicotine biosynthesis. Two novel tobacco transcription factors were found, NtORC1 and NtJAP1, that positively regulate the putrescine N-methyltransferase (PMT) promoter. In addition, combinatorial tests showed that these two factors act synergistically to induce PMT transcriptional activity. The development and use of high-throughput plant transient expression assays are discussed.
Keywords
automation, protoplast transient expression assay, gateway recombinational cloning, Arabidopsis, tobacco BY-2, alkaloid biosynthesis, MEDIATED PLANT TRANSFORMATION, GENE-EXPRESSION, NICOTINE BIOSYNTHESIS, SECONDARY METABOLISM, FUNCTIONAL GENOMICS, ETHYLENE SUPPRESSES, SUSPENSION-CULTURES, ARABIDOPSIS, CLONING, BINDING

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Chicago
De Sutter, Valerie, Rudy Vanderhaeghen, Sofie Tilleman, Freya Lammertyn, Isabelle Vanhoutte, Mansour Karimi, Dirk Inzé, Alain Goossens, and Pierre Hilson. 2005. “Exploration of Jasmonate Signalling via Automated and Standardized Transient Expression Assays in Tobacco Cells.” Plant Journal 44 (6): 1065–1076.
APA
De Sutter, V., Vanderhaeghen, R., Tilleman, S., Lammertyn, F., Vanhoutte, I., Karimi, M., Inzé, D., et al. (2005). Exploration of jasmonate signalling via automated and standardized transient expression assays in tobacco cells. PLANT JOURNAL, 44(6), 1065–1076.
Vancouver
1.
De Sutter V, Vanderhaeghen R, Tilleman S, Lammertyn F, Vanhoutte I, Karimi M, et al. Exploration of jasmonate signalling via automated and standardized transient expression assays in tobacco cells. PLANT JOURNAL. 2005;44(6):1065–76.
MLA
De Sutter, Valerie, Rudy Vanderhaeghen, Sofie Tilleman, et al. “Exploration of Jasmonate Signalling via Automated and Standardized Transient Expression Assays in Tobacco Cells.” PLANT JOURNAL 44.6 (2005): 1065–1076. Print.
@article{330922,
  abstract     = {Although sequence information and genome annotation are improving at an impressive pace, functional ontology is still non-existent or rudimentary for most genes. In this regard, transient expression assays are very valuable for identification of short functional segments in particular pathways, because they can be performed rapidly and at a scale unattainable in stably transformed tissues. Vectors were constructed and protocols developed for systematic transient assays in plant protoplasts. To enhance throughput and reproducibility, protoplast treatments were performed entirely by a liquid-handling robot in multiwell plates, including polyethylene glycol/Ca2+ cell transfection with plasmid mixtures, washes and lysis. All transcriptional readouts were measured using a dual firefly/Renilla luciferase assay, in which the former was controlled by a reporter promoter and the latter by the 35S CaMV promoter, which served as internal normalization standard. The automated protocols were suitable for transient assays in protoplasts prepared from cell cultures of Nicotiana tabacum Bright Yellow-2 and Arabidopsis thaliana. They were implemented in a screen to discover potential regulators of genes coding for key enzymes in nicotine biosynthesis. Two novel tobacco transcription factors were found, NtORC1 and NtJAP1, that positively regulate the putrescine N-methyltransferase (PMT) promoter. In addition, combinatorial tests showed that these two factors act synergistically to induce PMT transcriptional activity. The development and use of high-throughput plant transient expression assays are discussed.},
  author       = {De Sutter, Valerie and Vanderhaeghen, Rudy and Tilleman, Sofie and Lammertyn, Freya and Vanhoutte, Isabelle and Karimi, Mansour and Inz{\'e}, Dirk and Goossens, Alain and Hilson, Pierre},
  issn         = {0960-7412},
  journal      = {PLANT JOURNAL},
  language     = {eng},
  number       = {6},
  pages        = {1065--1076},
  title        = {Exploration of jasmonate signalling via automated and standardized transient expression assays in tobacco cells},
  url          = {http://dx.doi.org/10.1111/j.1365-313X.2005.02586.x},
  volume       = {44},
  year         = {2005},
}

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