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Pantoea rodasii sp. nov., Pantoea rwandensis sp. nov. and Pantoea wallisii sp. nov., isolated from Eucalyptus

Carrie Brady UGent, Ilse Cleenwerck UGent, Lorinda van der Westhuizen, Stephanus N Venter, Teresa A Coutinho and Paul De Vos UGent (2012) INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 62(7). p.1457-1464
abstract
Several Gram-negative-staining, facultatively anaerobic bacterial isolates were obtained from Eucalyptus seedlings showing symptoms of bacterial blight and dieback in Colombia, Rwanda and South Africa. Partial 16S rRNA gene sequencing, together with partial gyrB sequencing, placed the isolates in the genus Pantoea and indicated that they constituted three novel species. Multi locus sequence analysis (MLSA) based on partial sequences of gyrB, rpoB, infB and atpD revealed Pantoea dispersa, Pantoea eucrina and Pantoea cypripedii as their closest phylogenetic relatives. DNA-DNA hybridization studies confirmed the classification of the new isolates as three novel species and phenotypic tests allowed them to be differentiated from their closest phylogenetic neighbours. The names Pantoea rodasii sp. nov. [type strain LMG 26273(T)=BD 943(T) (deposited with the Plant Pathogenic and Plant Protecting Bacteria Collection, South Africa)=BCC 581(T) (deposited with the Bacterial Culture Collection, Forestry and Agricultural Institute, South Africa)], Pantoea rwandensis sp. nov. (type strain LMG 26275(T)=BD 944(T)=BCC 571(T)) and Pantoea wallisii sp. nov. (type strain LMG 26277(T)=BD 946(T)=BCC 682(T)) are proposed.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
subject
keyword
MAXIMUM-LIKELIHOOD, DEOXYRIBONUCLEIC-ACID, ENVIRONMENT, DNA, HYBRIDIZATION, STRAINS
journal title
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Int. J. Syst. Evol. Microbiol.
volume
62
issue
7
pages
1457 - 1464
Web of Science type
Article
Web of Science id
000307861500002
JCR category
MICROBIOLOGY
JCR impact factor
2.112 (2012)
JCR rank
68/116 (2012)
JCR quartile
3 (2012)
ISSN
1466-5026
DOI
10.1099/ijs.0.032615-0
language
English
UGent publication?
yes
classification
A1
copyright statement
I have transferred the copyright for this publication to the publisher
id
2050961
handle
http://hdl.handle.net/1854/LU-2050961
date created
2012-02-28 22:02:22
date last changed
2013-07-15 13:59:52
@article{2050961,
  abstract     = {Several Gram-negative-staining, facultatively anaerobic bacterial isolates were obtained from Eucalyptus seedlings showing symptoms of bacterial blight and dieback in Colombia, Rwanda and South Africa. Partial 16S rRNA gene sequencing, together with partial gyrB sequencing, placed the isolates in the genus Pantoea and indicated that they constituted three novel species. Multi locus sequence analysis (MLSA) based on partial sequences of gyrB, rpoB, infB and atpD revealed Pantoea dispersa, Pantoea eucrina and Pantoea cypripedii as their closest phylogenetic relatives. DNA-DNA hybridization studies confirmed the classification of the new isolates as three novel species and phenotypic tests allowed them to be differentiated from their closest phylogenetic neighbours. The names Pantoea rodasii sp. nov. [type strain LMG 26273(T)=BD 943(T) (deposited with the Plant Pathogenic and Plant Protecting Bacteria Collection, South Africa)=BCC 581(T) (deposited with the Bacterial Culture Collection, Forestry and Agricultural Institute, South Africa)], Pantoea rwandensis sp. nov. (type strain LMG 26275(T)=BD 944(T)=BCC 571(T)) and Pantoea wallisii sp. nov. (type strain LMG 26277(T)=BD 946(T)=BCC 682(T)) are proposed.},
  author       = {Brady, Carrie and Cleenwerck, Ilse and van der Westhuizen, Lorinda and Venter, Stephanus N and Coutinho, Teresa A and De Vos, Paul},
  issn         = {1466-5026},
  journal      = {INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY},
  keyword      = {MAXIMUM-LIKELIHOOD,DEOXYRIBONUCLEIC-ACID,ENVIRONMENT,DNA,HYBRIDIZATION,STRAINS},
  language     = {eng},
  number       = {7},
  pages        = {1457--1464},
  title        = {Pantoea rodasii sp. nov., Pantoea rwandensis sp. nov. and Pantoea wallisii sp. nov., isolated from Eucalyptus},
  url          = {http://dx.doi.org/10.1099/ijs.0.032615-0},
  volume       = {62},
  year         = {2012},
}

Chicago
Brady, Carrie, Ilse Cleenwerck, Lorinda van der Westhuizen, Stephanus N Venter, Teresa A Coutinho, and Paul De Vos. 2012. “Pantoea Rodasii Sp. Nov., Pantoea Rwandensis Sp. Nov. and Pantoea Wallisii Sp. Nov., Isolated from Eucalyptus.” International Journal of Systematic and Evolutionary Microbiology 62 (7): 1457–1464.
APA
Brady, Carrie, Cleenwerck, I., van der Westhuizen, L., Venter, S. N., Coutinho, T. A., & De Vos, P. (2012). Pantoea rodasii sp. nov., Pantoea rwandensis sp. nov. and Pantoea wallisii sp. nov., isolated from Eucalyptus. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 62(7), 1457–1464.
Vancouver
1.
Brady C, Cleenwerck I, van der Westhuizen L, Venter SN, Coutinho TA, De Vos P. Pantoea rodasii sp. nov., Pantoea rwandensis sp. nov. and Pantoea wallisii sp. nov., isolated from Eucalyptus. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 2012;62(7):1457–64.
MLA
Brady, Carrie, Ilse Cleenwerck, Lorinda van der Westhuizen, et al. “Pantoea Rodasii Sp. Nov., Pantoea Rwandensis Sp. Nov. and Pantoea Wallisii Sp. Nov., Isolated from Eucalyptus.” INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 62.7 (2012): 1457–1464. Print.