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Detecting the undetectable : uncovering duplicated segments in Arabidopsis by comparison with rice.

Klaas Vandepoele (UGent) , Cedric Simillion (UGent) and Yves Van de Peer (UGent)
(2002) TRENDS IN GENETICS. 18(12). p.606-608
Author
Organization
Abstract
Genome analysis shows that large-scale gene duplications have occurred in fungi, animals and plants, creating genomic regions that show similarity in gene content and order. However the high frequency of gene loss reduces colinearity resulting in duplicated regions that, in the extreme, no longer share homologous genes. Here, we show that by comparison with an appropriate second genome, such paralogous regions can still be identified.
Keywords
SEQUENCING PROJECT, DRAFT SEQUENCE, GENOME, THALIANA, GENES, PRESERVATION, CONSERVATION, SYNTENY

Citation

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Chicago
Vandepoele, Klaas, Cedric Simillion, and Yves Van de Peer. 2002. “Detecting the Undetectable : Uncovering Duplicated Segments in Arabidopsis by Comparison with Rice.” Trends in Genetics 18 (12): 606–608.
APA
Vandepoele, K., Simillion, C., & Van de Peer, Y. (2002). Detecting the undetectable : uncovering duplicated segments in Arabidopsis by comparison with rice. TRENDS IN GENETICS, 18(12), 606–608.
Vancouver
1.
Vandepoele K, Simillion C, Van de Peer Y. Detecting the undetectable : uncovering duplicated segments in Arabidopsis by comparison with rice. TRENDS IN GENETICS. 2002;18(12):606–8.
MLA
Vandepoele, Klaas, Cedric Simillion, and Yves Van de Peer. “Detecting the Undetectable : Uncovering Duplicated Segments in Arabidopsis by Comparison with Rice.” TRENDS IN GENETICS 18.12 (2002): 606–608. Print.
@article{154143,
  abstract     = {Genome analysis shows that large-scale gene duplications have occurred in fungi, animals and plants, creating genomic regions that show similarity in gene content and order. However the high frequency of gene loss reduces colinearity resulting in duplicated regions that, in the extreme, no longer share homologous genes. Here, we show that by comparison with an appropriate second genome, such paralogous regions can still be identified.},
  author       = {Vandepoele, Klaas and Simillion, Cedric and Van de Peer, Yves},
  issn         = {0168-9525},
  journal      = {TRENDS IN GENETICS},
  keyword      = {SEQUENCING PROJECT,DRAFT SEQUENCE,GENOME,THALIANA,GENES,PRESERVATION,CONSERVATION,SYNTENY},
  language     = {eng},
  number       = {12},
  pages        = {606--608},
  title        = {Detecting the undetectable : uncovering duplicated segments in Arabidopsis by comparison with rice.},
  volume       = {18},
  year         = {2002},
}

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