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Genome-wide expression analysis of plant cell cycle modulated genes

Peter Breyne (UGent) and Marc Zabeau (UGent)
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Abstract
Genome-wide expression analysis is rapidly becoming an essential tool for identifying and analysing genes involved in, or controlling, various biological processes ranging from development to responses to environmental cues. The control of cell division involves the temporal expression of different sets of genes, allowing the dividing cell to progress through the different phases of the cell cycle. A landmark study using DNA microarrays to follow the patterns of gene expression in synchronously dividing yeast cells has allowed the identification of several hundreds of genes that are involved in the cell cycle. Although DNA microarrays provide a convenient tool for genome-wide expression analysis, their use is limited to organisms for which the complete genome sequence or a large cDNA collection is available. For other organisms, including most plant species, DNA fragment analysis based methods, such as cDNA-AFLP, provide a more appropriate tool for genome-wide expression analysis. Furthermore, cDNA-AFLP exhibits properties that complement DNA microarrays and, hence, constitutes a useful tool for gene discovery.
Keywords
ARABIDOPSIS-THALIANA, SACCHAROMYCES-CEREVISIAE, SERIAL ANALYSIS, MOLECULAR CLASSIFICATION, RNA EXPRESSION, MESSENGER-RNA, MICROARRAYS, PROFILES, IDENTIFICATION, TRANSCRIPTION

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Citation

Please use this url to cite or link to this publication:

Chicago
Breyne, Peter, and Marc Zabeau. 2001. “Genome-wide Expression Analysis of Plant Cell Cycle Modulated Genes.” Current Opinion in Plant Biology 4 (2): 136–142.
APA
Breyne, Peter, & Zabeau, M. (2001). Genome-wide expression analysis of plant cell cycle modulated genes. CURRENT OPINION IN PLANT BIOLOGY, 4(2), 136–142.
Vancouver
1.
Breyne P, Zabeau M. Genome-wide expression analysis of plant cell cycle modulated genes. CURRENT OPINION IN PLANT BIOLOGY. 2001;4(2):136–42.
MLA
Breyne, Peter, and Marc Zabeau. “Genome-wide Expression Analysis of Plant Cell Cycle Modulated Genes.” CURRENT OPINION IN PLANT BIOLOGY 4.2 (2001): 136–142. Print.
@article{138580,
  abstract     = {Genome-wide expression analysis is rapidly becoming an essential tool for identifying and analysing genes involved in, or controlling, various biological processes ranging from development to responses to environmental cues. The control of cell division involves the temporal expression of different sets of genes, allowing the dividing cell to progress through the different phases of the cell cycle. A landmark study using DNA microarrays to follow the patterns of gene expression in synchronously dividing yeast cells has allowed the identification of several hundreds of genes that are involved in the cell cycle. Although DNA microarrays provide a convenient tool for genome-wide expression analysis, their use is limited to organisms for which the complete genome sequence or a large cDNA collection is available. For other organisms, including most plant species, DNA fragment analysis based methods, such as cDNA-AFLP, provide a more appropriate tool for genome-wide expression analysis. Furthermore, cDNA-AFLP exhibits properties that complement DNA microarrays and, hence, constitutes a useful tool for gene discovery.},
  author       = {Breyne, Peter and Zabeau, Marc},
  issn         = {1369-5266},
  journal      = {CURRENT OPINION IN PLANT BIOLOGY},
  keyword      = {ARABIDOPSIS-THALIANA,SACCHAROMYCES-CEREVISIAE,SERIAL ANALYSIS,MOLECULAR CLASSIFICATION,RNA EXPRESSION,MESSENGER-RNA,MICROARRAYS,PROFILES,IDENTIFICATION,TRANSCRIPTION},
  language     = {eng},
  number       = {2},
  pages        = {136--142},
  title        = {Genome-wide expression analysis of plant cell cycle modulated genes},
  url          = {http://dx.doi.org/10.1016/S1369-5266(00)00149-7},
  volume       = {4},
  year         = {2001},
}

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