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Identification of new polymorphic microsatellite markers in the NA1 and NA2 lineages of Phytophthora ramorum

Annelies Vercauteren UGent, Meg Larsen, Erica Goss, Niklaus J Grünwald, Martine Maes and Kurt Heungens (2011) MYCOLOGIA. 103(6). p.1245-1249
abstract
Phytophthora ramorum is a recently introduced pathogen in Europe and North America consisting of three clonal lineages. Due to the very limited intra-lineage genetic variation, only a few polymorphic markers are available for use in studies involving the epidemiology and evolution of P. ramorum. A total of 159 primer pairs for candidate polymorphic SSR loci were tested with universal labeling. Four polymorphic microsatellite loci were identified within the NA1 lineage and one within the NA2 lineage, demonstrating the power and flexibility of the screening technique. The markers may significantly increase the number of genotypes that can be identified, and as such can help better characterize the North American lineages of P. ramorum.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
subject
keyword
NURSERY, MIGRATION, CALIFORNIA, NORTH-AMERICA, CLONAL LINEAGES, OAK DEATH PATHOGEN, Sudden Oak Death, oomycetes, microsatellite markers, genetic diversity, universal labeling
journal title
MYCOLOGIA
Mycologia
volume
103
issue
6
pages
1245 - 1249
Web of Science type
Article
Web of Science id
000297387900009
JCR category
MYCOLOGY
JCR impact factor
2.031 (2011)
JCR rank
11/24 (2011)
JCR quartile
2 (2011)
ISSN
0027-5514
DOI
10.3852/10-420
language
English
UGent publication?
no
classification
A1
id
1260524
handle
http://hdl.handle.net/1854/LU-1260524
date created
2011-06-11 19:41:40
date last changed
2012-04-26 16:22:36
@article{1260524,
  abstract     = {Phytophthora ramorum is a recently introduced pathogen in Europe and North America consisting of three clonal lineages. Due to the very limited intra-lineage genetic variation, only a few polymorphic markers are available for use in studies involving the epidemiology and evolution of P. ramorum. A total of 159 primer pairs for candidate polymorphic SSR loci were tested with universal labeling. Four polymorphic microsatellite loci were identified within the NA1 lineage and one within the NA2 lineage, demonstrating the power and flexibility of the screening technique. The markers may significantly increase the number of genotypes that can be identified, and as such can help better characterize the North American lineages of P. ramorum.},
  author       = {Vercauteren, Annelies and Larsen, Meg and Goss, Erica  and Gr{\"u}nwald, Niklaus J and Maes, Martine and Heungens, Kurt},
  issn         = {0027-5514},
  journal      = {MYCOLOGIA},
  keyword      = {NURSERY,MIGRATION,CALIFORNIA,NORTH-AMERICA,CLONAL LINEAGES,OAK DEATH PATHOGEN,Sudden Oak Death,oomycetes,microsatellite markers,genetic diversity,universal labeling},
  language     = {eng},
  number       = {6},
  pages        = {1245--1249},
  title        = {Identification of new polymorphic microsatellite markers in the NA1 and NA2 lineages of Phytophthora ramorum},
  url          = {http://dx.doi.org/10.3852/10-420},
  volume       = {103},
  year         = {2011},
}

Chicago
Vercauteren, Annelies, Meg Larsen, Erica Goss, Niklaus J Grünwald, Martine Maes, and Kurt Heungens. 2011. “Identification of New Polymorphic Microsatellite Markers in the NA1 and NA2 Lineages of Phytophthora Ramorum.” Mycologia 103 (6): 1245–1249.
APA
Vercauteren, Annelies, Larsen, M., Goss, E., Grünwald, N. J., Maes, M., & Heungens, K. (2011). Identification of new polymorphic microsatellite markers in the NA1 and NA2 lineages of Phytophthora ramorum. MYCOLOGIA, 103(6), 1245–1249.
Vancouver
1.
Vercauteren A, Larsen M, Goss E, Grünwald NJ, Maes M, Heungens K. Identification of new polymorphic microsatellite markers in the NA1 and NA2 lineages of Phytophthora ramorum. MYCOLOGIA. 2011;103(6):1245–9.
MLA
Vercauteren, Annelies, Meg Larsen, Erica Goss, et al. “Identification of New Polymorphic Microsatellite Markers in the NA1 and NA2 Lineages of Phytophthora Ramorum.” MYCOLOGIA 103.6 (2011): 1245–1249. Print.