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SNP detection in Na/K ATP-ase gene alpha(1) subunit of bisexual and parthenogenetic Artemia strains by RFLP screening

Ramin Manaffar, S Zare, N Agh, N Abdolahzadeh, S Soltanian, Patrick Sorgeloos UGent, Peter Bossier UGent and Gilbert Van Stappen UGent (2011) MOLECULAR ECOLOGY RESOURCES. 11(1). p.211-214
abstract
In order to find a marker for differentiating between a bisexual and a parthenogenetic Artemia strain, Exon-7 of the Na/K ATPase alpha(1) subunit gene was screened by RFLP technique. The results revealed a constant synonymous SNP (single nucleotide polymorphism) in digestion by the Tru1I enzyme that was consistent with these two types of Artemia. This SNP was identified as an accurate molecular marker for discrimination between bisexual and parthenogenetic Artemia. According to the Nei's genetic distance (1973), the lowest genetic distance was found between individuals from Artemia urmiana Gunther 1890 and parthenogenetic populations, making the described marker the first marker to easily distinguish between these two cooccurring species.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
subject
keyword
POPULATIONS, POLYMORPHISM, NA+/K+-ATPASE, OLD-WORLD STRAINS, BRINE SHRIMP ARTEMIA, RFL, polymorphism, K ATPase, Artemia, Na, FRANCISCANA, EMPHASIS, SALINA
journal title
MOLECULAR ECOLOGY RESOURCES
Mol. Ecol. Resour.
volume
11
issue
1
pages
211 - 214
Web of Science type
Article
Web of Science id
000285249800031
JCR category
ECOLOGY
JCR impact factor
3.062 (2011)
JCR rank
37/130 (2011)
JCR quartile
2 (2011)
ISSN
1755-098X
DOI
10.1111/j.1755-0998.2010.02908.x
language
English
UGent publication?
yes
classification
A1
copyright statement
I have transferred the copyright for this publication to the publisher
id
1192104
handle
http://hdl.handle.net/1854/LU-1192104
date created
2011-03-21 10:30:29
date last changed
2016-12-19 15:45:14
@article{1192104,
  abstract     = {In order to find a marker for differentiating between a bisexual and a parthenogenetic Artemia strain, Exon-7 of the Na/K ATPase alpha(1) subunit gene was screened by RFLP technique. The results revealed a constant synonymous SNP (single nucleotide polymorphism) in digestion by the Tru1I enzyme that was consistent with these two types of Artemia. This SNP was identified as an accurate molecular marker for discrimination between bisexual and parthenogenetic Artemia. According to the Nei's genetic distance (1973), the lowest genetic distance was found between individuals from Artemia urmiana Gunther 1890 and parthenogenetic populations, making the described marker the first marker to easily distinguish between these two cooccurring species.},
  author       = {Manaffar, Ramin and Zare, S and Agh, N and Abdolahzadeh, N and Soltanian, S and Sorgeloos, Patrick and Bossier, Peter and Van Stappen, Gilbert},
  issn         = {1755-098X},
  journal      = {MOLECULAR ECOLOGY RESOURCES},
  keyword      = {POPULATIONS,POLYMORPHISM,NA+/K+-ATPASE,OLD-WORLD STRAINS,BRINE SHRIMP ARTEMIA,RFL,polymorphism,K ATPase,Artemia,Na,FRANCISCANA,EMPHASIS,SALINA},
  language     = {eng},
  number       = {1},
  pages        = {211--214},
  title        = {SNP detection in Na/K ATP-ase gene alpha(1) subunit of bisexual and parthenogenetic Artemia strains by RFLP screening},
  url          = {http://dx.doi.org/10.1111/j.1755-0998.2010.02908.x},
  volume       = {11},
  year         = {2011},
}

Chicago
Manaffar, Ramin, S Zare, N Agh, N Abdolahzadeh, S Soltanian, Patrick Sorgeloos, Peter Bossier, and Gilbert Van Stappen. 2011. “SNP Detection in Na/K ATP-ase Gene Alpha(1) Subunit of Bisexual and Parthenogenetic Artemia Strains by RFLP Screening.” Molecular Ecology Resources 11 (1): 211–214.
APA
Manaffar, Ramin, Zare, S., Agh, N., Abdolahzadeh, N., Soltanian, S., Sorgeloos, P., Bossier, P., et al. (2011). SNP detection in Na/K ATP-ase gene alpha(1) subunit of bisexual and parthenogenetic Artemia strains by RFLP screening. MOLECULAR ECOLOGY RESOURCES, 11(1), 211–214.
Vancouver
1.
Manaffar R, Zare S, Agh N, Abdolahzadeh N, Soltanian S, Sorgeloos P, et al. SNP detection in Na/K ATP-ase gene alpha(1) subunit of bisexual and parthenogenetic Artemia strains by RFLP screening. MOLECULAR ECOLOGY RESOURCES. 2011;11(1):211–4.
MLA
Manaffar, Ramin, S Zare, N Agh, et al. “SNP Detection in Na/K ATP-ase Gene Alpha(1) Subunit of Bisexual and Parthenogenetic Artemia Strains by RFLP Screening.” MOLECULAR ECOLOGY RESOURCES 11.1 (2011): 211–214. Print.