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TAPIR, a web server for the prediction of plant microRNA targets, including target mimics

Bonnet, Eric UGent, He, Ying, Billiau, Kenny UGent and Van de Peer, Yves UGent (2010) BIOINFORMATICS. 26(12). p.1566-1568
abstract
We present a new web server called TAPIR, designed for the prediction of plant microRNA targets. The server offers the possibility to search for plant miRNA targets using a fast and a precise algorithm. The precise option is much slower but guarantees to find less perfectly paired miRNA-target duplexes. Furthermore, the precise option allows the prediction of target mimics, which are characterized by a miRNA-target duplex having a large loop, making them undetectable by traditional tools.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
subject
keyword
ARABIDOPSIS, SIRNA
journal title
BIOINFORMATICS
Bioinformatics
volume
26
issue
12
pages
1566 - 1568
Web of Science type
Article
Web of Science id
000278689000065
JCR category
MATHEMATICAL & COMPUTATIONAL BIOLOGY
JCR impact factor
4.877 (2010)
JCR rank
2/35 (2010)
JCR quartile
1 (2010)
ISSN
1367-4803
DOI
10.1093/bioinformatics/btq233
language
English
UGent publication?
yes
classification
A1
copyright statement
I have transferred the copyright for this publication to the publisher
id
1008305
handle
http://hdl.handle.net/1854/LU-1008305
date created
2010-07-09 17:46:06
date last changed
2016-12-19 15:42:10
@article{1008305,
  abstract     = {We present a new web server called TAPIR, designed for the prediction of plant microRNA targets. The server offers the possibility to search for plant miRNA targets using a fast and a precise algorithm. The precise option is much slower but guarantees to find less perfectly paired miRNA-target duplexes. Furthermore, the precise option allows the prediction of target mimics, which are characterized by a miRNA-target duplex having a large loop, making them undetectable by traditional tools.},
  author       = {Bonnet, Eric and He, Ying and Billiau, Kenny and Van de Peer, Yves},
  issn         = {1367-4803},
  journal      = {BIOINFORMATICS},
  keyword      = {ARABIDOPSIS,SIRNA},
  language     = {eng},
  number       = {12},
  pages        = {1566--1568},
  title        = {TAPIR, a web server for the prediction of plant microRNA targets, including target mimics},
  url          = {http://dx.doi.org/10.1093/bioinformatics/btq233},
  volume       = {26},
  year         = {2010},
}

Chicago
Bonnet, Eric, Ying He, Kenny Billiau, and Yves Van de Peer. 2010. “TAPIR, a Web Server for the Prediction of Plant microRNA Targets, Including Target Mimics.” Bioinformatics 26 (12): 1566–1568.
APA
Bonnet, E., He, Y., Billiau, K., & Van de Peer, Y. (2010). TAPIR, a web server for the prediction of plant microRNA targets, including target mimics. BIOINFORMATICS, 26(12), 1566–1568.
Vancouver
1.
Bonnet E, He Y, Billiau K, Van de Peer Y. TAPIR, a web server for the prediction of plant microRNA targets, including target mimics. BIOINFORMATICS. 2010;26(12):1566–8.
MLA
Bonnet, Eric, Ying He, Kenny Billiau, et al. “TAPIR, a Web Server for the Prediction of Plant microRNA Targets, Including Target Mimics.” BIOINFORMATICS 26.12 (2010): 1566–1568. Print.