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TAPIR, a web server for the prediction of plant microRNA targets, including target mimics

Eric Bonnet UGent, Ying He UGent, Kenny Billiau UGent and Yves Van de Peer UGent (2010) BIOINFORMATICS. 26(12). p.1566-1568
abstract
We present a new web server called TAPIR, designed for the prediction of plant microRNA targets. The server offers the possibility to search for plant miRNA targets using a fast and a precise algorithm. The precise option is much slower but guarantees to find less perfectly paired miRNA-target duplexes. Furthermore, the precise option allows the prediction of target mimics, which are characterized by a miRNA-target duplex having a large loop, making them undetectable by traditional tools.
Please use this url to cite or link to this publication:
author
organization
year
type
journalArticle (original)
publication status
published
subject
keyword
ARABIDOPSIS, SIRNA
journal title
BIOINFORMATICS
Bioinformatics
volume
26
issue
12
pages
1566 - 1568
Web of Science type
Article
Web of Science id
000278689000065
JCR category
MATHEMATICAL & COMPUTATIONAL BIOLOGY
JCR impact factor
4.877 (2010)
JCR rank
2/35 (2010)
JCR quartile
1 (2010)
ISSN
1367-4803
DOI
10.1093/bioinformatics/btq233
language
English
UGent publication?
yes
classification
A1
copyright statement
I have transferred the copyright for this publication to the publisher
id
1008305
handle
http://hdl.handle.net/1854/LU-1008305
date created
2010-07-09 17:46:06
date last changed
2012-09-19 14:03:40
@article{1008305,
  abstract     = {We present a new web server called TAPIR, designed for the prediction of plant microRNA targets. The server offers the possibility to search for plant miRNA targets using a fast and a precise algorithm. The precise option is much slower but guarantees to find less perfectly paired miRNA-target duplexes. Furthermore, the precise option allows the prediction of target mimics, which are characterized by a miRNA-target duplex having a large loop, making them undetectable by traditional tools.},
  author       = {Bonnet, Eric and He, Ying and Billiau, Kenny and Van de Peer, Yves},
  issn         = {1367-4803},
  journal      = {BIOINFORMATICS},
  keyword      = {ARABIDOPSIS,SIRNA},
  language     = {eng},
  number       = {12},
  pages        = {1566--1568},
  title        = {TAPIR, a web server for the prediction of plant microRNA targets, including target mimics},
  url          = {http://dx.doi.org/10.1093/bioinformatics/btq233},
  volume       = {26},
  year         = {2010},
}

Chicago
Bonnet, Eric, Ying He, Kenny Billiau, and Yves Van de Peer. 2010. “TAPIR, a Web Server for the Prediction of Plant microRNA Targets, Including Target Mimics.” Bioinformatics 26 (12): 1566–1568.
APA
Bonnet, E., He, Y., Billiau, K., & Van de Peer, Y. (2010). TAPIR, a web server for the prediction of plant microRNA targets, including target mimics. BIOINFORMATICS, 26(12), 1566–1568.
Vancouver
1.
Bonnet E, He Y, Billiau K, Van de Peer Y. TAPIR, a web server for the prediction of plant microRNA targets, including target mimics. BIOINFORMATICS. 2010;26(12):1566–8.
MLA
Bonnet, Eric, Ying He, Kenny Billiau, et al. “TAPIR, a Web Server for the Prediction of Plant microRNA Targets, Including Target Mimics.” BIOINFORMATICS 26.12 (2010): 1566–1568. Print.