TAPIR, a web server for the prediction of plant microRNA targets, including target mimics
(2010) BIOINFORMATICS. 26(12). p.1566-1568- abstract
- We present a new web server called TAPIR, designed for the prediction of plant microRNA targets. The server offers the possibility to search for plant miRNA targets using a fast and a precise algorithm. The precise option is much slower but guarantees to find less perfectly paired miRNA-target duplexes. Furthermore, the precise option allows the prediction of target mimics, which are characterized by a miRNA-target duplex having a large loop, making them undetectable by traditional tools.
Please use this url to cite or link to this publication:
http://hdl.handle.net/1854/LU-1008305
- author
- Eric Bonnet UGent, Ying He, Kenny Billiau UGent and Yves Van de Peer UGent
- organization
- year
- 2010
- type
- journalArticle (original)
- publication status
- published
- subject
- keyword
- ARABIDOPSIS, SIRNA
- journal title
- BIOINFORMATICS
- Bioinformatics
- volume
- 26
- issue
- 12
- pages
- 1566 - 1568
- Web of Science type
- Article
- Web of Science id
- 000278689000065
- JCR category
- MATHEMATICAL & COMPUTATIONAL BIOLOGY
- JCR impact factor
- 4.877 (2010)
- JCR rank
- 2/35 (2010)
- JCR quartile
- 1 (2010)
- ISSN
- 1367-4803
- DOI
- 10.1093/bioinformatics/btq233
- language
- English
- UGent publication?
- yes
- classification
- A1
- copyright statement
- I have transferred the copyright for this publication to the publisher
- id
- 1008305
- handle
- http://hdl.handle.net/1854/LU-1008305
- date created
- 2010-07-09 17:46:06
- date last changed
- 2016-12-19 15:42:10
@article{1008305,
abstract = {We present a new web server called TAPIR, designed for the prediction of plant microRNA targets. The server offers the possibility to search for plant miRNA targets using a fast and a precise algorithm. The precise option is much slower but guarantees to find less perfectly paired miRNA-target duplexes. Furthermore, the precise option allows the prediction of target mimics, which are characterized by a miRNA-target duplex having a large loop, making them undetectable by traditional tools.},
author = {Bonnet, Eric and He, Ying and Billiau, Kenny and Van de Peer, Yves},
issn = {1367-4803},
journal = {BIOINFORMATICS},
keyword = {ARABIDOPSIS,SIRNA},
language = {eng},
number = {12},
pages = {1566--1568},
title = {TAPIR, a web server for the prediction of plant microRNA targets, including target mimics},
url = {http://dx.doi.org/10.1093/bioinformatics/btq233},
volume = {26},
year = {2010},
}
- Chicago
- Bonnet, Eric, Ying He, Kenny Billiau, and Yves Van de Peer. 2010. “TAPIR, a Web Server for the Prediction of Plant microRNA Targets, Including Target Mimics.” Bioinformatics 26 (12): 1566–1568.
- APA
- Bonnet, E., He, Y., Billiau, K., & Van de Peer, Y. (2010). TAPIR, a web server for the prediction of plant microRNA targets, including target mimics. BIOINFORMATICS, 26(12), 1566–1568.
- Vancouver
- 1.Bonnet E, He Y, Billiau K, Van de Peer Y. TAPIR, a web server for the prediction of plant microRNA targets, including target mimics. BIOINFORMATICS. 2010;26(12):1566–8.
- MLA
- Bonnet, Eric, Ying He, Kenny Billiau, et al. “TAPIR, a Web Server for the Prediction of Plant microRNA Targets, Including Target Mimics.” BIOINFORMATICS 26.12 (2010): 1566–1568. Print.