Skin mucus proteins of lumpsucker (Cyclopterus lumpus)
- Author
- Deepti Manjari Patel (UGent) and Monica.F. Brinchmann
- Organization
- Abstract
- Fish skin mucus serves as a first line of defense against pathogens and external stressors. In this study the proteomic profile of lumpsucker skin mucus was characterized using 2D gels coupled with tandem mass spectrometry. Mucosal proteins were identified by homology searches across the databases SwissProt, NCBInr and vertebrate EST. The identified proteins were clustered into ten groups based on their gene ontology biological process in PANTHER (www.patherdb.org). Calmodulin, cystatin-B, histone H2B, peroxiredoxin1, apolipoprotein A1, natterin-2, 14-3-3 protein, alfa enolase, pentraxin, warm temperature acclimation 65 kDa (WAP65kDa) and heat shock proteins were identified. Several of the proteins are known to be involved in immune and/or stress responses. Proteomic profile established in this study could be a benchmark for differential proteomics studies.
- Keywords
- Lumpsucker, Cyclopterus lumpus, Skin mucus, 2D gel, Mass spectrometry, Proteome, Mucosal immunity, Stress, Biomarker
Citation
Please use this url to cite or link to this publication: http://hdl.handle.net/1854/LU-01K04NRS0YHAS6KB85025JVWJ1
- MLA
- Patel, Deepti Manjari, and Monica. F. Brinchmann. “Skin Mucus Proteins of Lumpsucker (Cyclopterus Lumpus).” BIOCHEMISTRY AND BIOPHYSICS REPORTS, vol. 9, 2017, pp. 217–25, doi:10.1016/j.bbrep.2016.12.016.
- APA
- Patel, D. M., & Brinchmann, Monica. F. (2017). Skin mucus proteins of lumpsucker (Cyclopterus lumpus). BIOCHEMISTRY AND BIOPHYSICS REPORTS, 9, 217–225. https://doi.org/10.1016/j.bbrep.2016.12.016
- Chicago author-date
- Patel, Deepti Manjari, and Monica.F. Brinchmann. 2017. “Skin Mucus Proteins of Lumpsucker (Cyclopterus Lumpus).” BIOCHEMISTRY AND BIOPHYSICS REPORTS 9: 217–25. https://doi.org/10.1016/j.bbrep.2016.12.016.
- Chicago author-date (all authors)
- Patel, Deepti Manjari, and Monica.F. Brinchmann. 2017. “Skin Mucus Proteins of Lumpsucker (Cyclopterus Lumpus).” BIOCHEMISTRY AND BIOPHYSICS REPORTS 9: 217–225. doi:10.1016/j.bbrep.2016.12.016.
- Vancouver
- 1.Patel DM, Brinchmann MonicaF. Skin mucus proteins of lumpsucker (Cyclopterus lumpus). BIOCHEMISTRY AND BIOPHYSICS REPORTS. 2017;9:217–25.
- IEEE
- [1]D. M. Patel and Monica. F. Brinchmann, “Skin mucus proteins of lumpsucker (Cyclopterus lumpus),” BIOCHEMISTRY AND BIOPHYSICS REPORTS, vol. 9, pp. 217–225, 2017.
@article{01K04NRS0YHAS6KB85025JVWJ1,
abstract = {{Fish skin mucus serves as a first line of defense against pathogens and external stressors. In this study the proteomic profile of lumpsucker skin mucus was characterized using 2D gels coupled with tandem mass spectrometry. Mucosal proteins were identified by homology searches across the databases SwissProt, NCBInr and vertebrate EST. The identified proteins were clustered into ten groups based on their gene ontology biological process in PANTHER (www.patherdb.org). Calmodulin, cystatin-B, histone H2B, peroxiredoxin1, apolipoprotein A1, natterin-2, 14-3-3 protein, alfa enolase, pentraxin, warm temperature acclimation 65 kDa (WAP65kDa) and heat shock proteins were identified. Several of the proteins are known to be involved in immune and/or stress responses. Proteomic profile established in this study could be a benchmark for differential proteomics studies.}},
author = {{Patel, Deepti Manjari and Brinchmann, Monica.F.}},
issn = {{2405-5808}},
journal = {{BIOCHEMISTRY AND BIOPHYSICS REPORTS}},
keywords = {{Lumpsucker,Cyclopterus lumpus,Skin mucus,2D gel,Mass spectrometry,Proteome,Mucosal immunity,Stress,Biomarker}},
language = {{eng}},
pages = {{217--225}},
title = {{Skin mucus proteins of lumpsucker (Cyclopterus lumpus)}},
url = {{http://doi.org/10.1016/j.bbrep.2016.12.016}},
volume = {{9}},
year = {{2017}},
}
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