Mapping bacterial extracellular vesicle research : insights, best practices and knowledge gaps
- Author
- Nele De Langhe (UGent) , Sofie Van Dorpe (UGent) , Niké Guilbert (UGent) , Amélie Vander Cruyssen (UGent) , Quentin Roux, Sarah Deville (UGent) , Sandor Dedeyne (UGent) , Philippe Tummers (UGent) , Hannelore Denys (UGent) , Linos Vandekerckhove (UGent) , Olivier De Wever (UGent) and An Hendrix (UGent)
- Organization
- Project
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- ModulatIng Cancer therapy RespOnse using Bacterial Extracellular nanovesicles
- TRAIN-EV (Training in Extracellular Vesicles: for benefit in Health and Disease)
- Strategies against persistent HIV-1 reservoirs
- Natural variations in extracellular vesicles subpopulations and RNA composition
- Analyzing circulating bacterial extracellular vesicles in cancer patients to identify their composition and biomarker potential.
- Exploring the biology of bacterial extracellular vesicles in human biofluids.
- Unravelling uptake and function of systemic bacterial extracellular vesicles in cancer patients using clinically relevant in vitro, ex vivo and in vivo models.
- Exploring the biology and application of systemically circulating bacterial extracellular vesicles in cancer patients.
- Abstract
- Bacterial extracellular vesicles (BEVs) enable communication between bacteria and their natural habitats, including multicellular organisms such as humans. Consequently, the study of BEVs has rapidly gained attention with recent research raising the prospect of developing BEVs as biomarkers and treatments to manage (mal)functioning of natural habitats. Although diverse technologies are available, the composition of their source, their heterogeneity in biophysical and biochemical features, and their multifaceted cargo composition challenges the analysis of BEVs. To map current practices in BEV research, we analyzed 845 publications released in 2015–2021, reporting 3338 BEV-related experiments. The extracted data are accessible via the publicly available EV-TRACK knowledgebase (https://evtrack.org/). We identify the need for transparent reporting, delineate knowledge gaps, outline available best practices and define areas in need of guidance to ensure advances in BEV research and accelerate BEV applications.
- Keywords
- OUTER-MEMBRANE VESICLES, IMMUNE REGULATION, MICROORGANISMS, BIOGENESIS
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Citation
Please use this url to cite or link to this publication: http://hdl.handle.net/1854/LU-01JBVD1F937KHYB2AKS7EHNRB5
- MLA
- De Langhe, Nele, et al. “Mapping Bacterial Extracellular Vesicle Research : Insights, Best Practices and Knowledge Gaps.” NATURE COMMUNICATIONS, vol. 15, no. 1, 2024, doi:10.1038/s41467-024-53279-1.
- APA
- De Langhe, N., Van Dorpe, S., Guilbert, N., Vander Cruyssen, A., Roux, Q., Deville, S., … Hendrix, A. (2024). Mapping bacterial extracellular vesicle research : insights, best practices and knowledge gaps. NATURE COMMUNICATIONS, 15(1). https://doi.org/10.1038/s41467-024-53279-1
- Chicago author-date
- De Langhe, Nele, Sofie Van Dorpe, Niké Guilbert, Amélie Vander Cruyssen, Quentin Roux, Sarah Deville, Sandor Dedeyne, et al. 2024. “Mapping Bacterial Extracellular Vesicle Research : Insights, Best Practices and Knowledge Gaps.” NATURE COMMUNICATIONS 15 (1). https://doi.org/10.1038/s41467-024-53279-1.
- Chicago author-date (all authors)
- De Langhe, Nele, Sofie Van Dorpe, Niké Guilbert, Amélie Vander Cruyssen, Quentin Roux, Sarah Deville, Sandor Dedeyne, Philippe Tummers, Hannelore Denys, Linos Vandekerckhove, Olivier De Wever, and An Hendrix. 2024. “Mapping Bacterial Extracellular Vesicle Research : Insights, Best Practices and Knowledge Gaps.” NATURE COMMUNICATIONS 15 (1). doi:10.1038/s41467-024-53279-1.
- Vancouver
- 1.De Langhe N, Van Dorpe S, Guilbert N, Vander Cruyssen A, Roux Q, Deville S, et al. Mapping bacterial extracellular vesicle research : insights, best practices and knowledge gaps. NATURE COMMUNICATIONS. 2024;15(1).
- IEEE
- [1]N. De Langhe et al., “Mapping bacterial extracellular vesicle research : insights, best practices and knowledge gaps,” NATURE COMMUNICATIONS, vol. 15, no. 1, 2024.
@article{01JBVD1F937KHYB2AKS7EHNRB5,
abstract = {{Bacterial extracellular vesicles (BEVs) enable communication between bacteria and their natural habitats, including multicellular organisms such as humans. Consequently, the study of BEVs has rapidly gained attention with recent research raising the prospect of developing BEVs as biomarkers and treatments to manage (mal)functioning of natural habitats. Although diverse technologies are available, the composition of their source, their heterogeneity in biophysical and biochemical features, and their multifaceted cargo composition challenges the analysis of BEVs. To map current practices in BEV research, we analyzed 845 publications released in 2015–2021, reporting 3338 BEV-related experiments. The extracted data are accessible via the publicly available EV-TRACK knowledgebase (https://evtrack.org/). We identify the need for transparent reporting, delineate knowledge gaps, outline available best practices and define areas in need of guidance to ensure advances in BEV research and accelerate BEV applications.}},
articleno = {{9410}},
author = {{De Langhe, Nele and Van Dorpe, Sofie and Guilbert, Niké and Vander Cruyssen, Amélie and Roux, Quentin and Deville, Sarah and Dedeyne, Sandor and Tummers, Philippe and Denys, Hannelore and Vandekerckhove, Linos and De Wever, Olivier and Hendrix, An}},
issn = {{2041-1723}},
journal = {{NATURE COMMUNICATIONS}},
keywords = {{OUTER-MEMBRANE VESICLES,IMMUNE REGULATION,MICROORGANISMS,BIOGENESIS}},
language = {{eng}},
number = {{1}},
pages = {{13}},
title = {{Mapping bacterial extracellular vesicle research : insights, best practices and knowledge gaps}},
url = {{http://doi.org/10.1038/s41467-024-53279-1}},
volume = {{15}},
year = {{2024}},
}
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