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Soil type and associated microbiome influence chitin's growth promotion effect in lettuce

(2024) PHYTOBIOMES JOURNAL. 8(3). p.248-261
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Abstract
Chitin amendment of peat substrate has been proven effective in promoting lettuce growth and increasing phenolic compounds in lettuce seedlings. However, the effect of chitin soil amendment on lettuce growth in mineral soil remains unexplored. The effect of chitin amendment of mineral soil on lettuce growth and metabolite changes was investigated for the first time in the present study in comparison with chitin-amended peat substrate. Our findings showed that chitin addition in peat substrate increased lettuce head weight by approximately 50% at harvest, whereas this increase was 30% when chitin was added to mineral soil. Targeted metabolomics analysis indicated that chitin addition affected the phenolic compounds in lettuce seedlings, but this effect varied between soil types. Moreover, untargeted metabolomics analysis suggested that using peat substrate or mineral soil had a greater influence on produced lettuce metabolites than chitin addition. Rhizobiome analysis showed that specifically Mortierellaceae family members, known for chitin degradation and plant growth promotion, significantly increased in peat substrate upon chitin treatment. In mineral soil, three bacterial genera and five fungi, including known plant-growth-promoting genera, were significantly more abundant upon chitin treatment but Mortierellaceae family members were not. We assume that the observed effects primarily stem from soil characteristics and from chitin-induced alterations in rhizobiome composition, particularly the presence of Mortierellaceae members, leading to promoted lettuce growth. Despite the variability, chitin remains an environmentally friendly alternative to synthetic fertilizers in lettuce production, but its beneficial effects are dependent on rhizobiome composition, which should be considered before chitin application.
Keywords
chitin, microbiome, growth promotion, lettuce, metabarcoding, metabolomics, BIOCONTROL AGENT, AGRICULTURE, SILVA

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MLA
Kaufmann, Moritz, et al. “Soil Type and Associated Microbiome Influence Chitin’s Growth Promotion Effect in Lettuce.” PHYTOBIOMES JOURNAL, vol. 8, no. 3, 2024, pp. 248–61, doi:10.1094/pbiomes-12-23-0132-r.
APA
Kaufmann, M., Li, L., Van Poucke, C., Rhyner, N., De Tender, C., Uyttendaele, M., … Cottyn, B. (2024). Soil type and associated microbiome influence chitin’s growth promotion effect in lettuce. PHYTOBIOMES JOURNAL, 8(3), 248–261. https://doi.org/10.1094/pbiomes-12-23-0132-r
Chicago author-date
Kaufmann, Moritz, Leilei Li, Christof Van Poucke, Nicola Rhyner, Caroline De Tender, Mieke Uyttendaele, Marc Heyndrickx, Cyril Zipfel, Joël F. Pothier, and Bart Cottyn. 2024. “Soil Type and Associated Microbiome Influence Chitin’s Growth Promotion Effect in Lettuce.” PHYTOBIOMES JOURNAL 8 (3): 248–61. https://doi.org/10.1094/pbiomes-12-23-0132-r.
Chicago author-date (all authors)
Kaufmann, Moritz, Leilei Li, Christof Van Poucke, Nicola Rhyner, Caroline De Tender, Mieke Uyttendaele, Marc Heyndrickx, Cyril Zipfel, Joël F. Pothier, and Bart Cottyn. 2024. “Soil Type and Associated Microbiome Influence Chitin’s Growth Promotion Effect in Lettuce.” PHYTOBIOMES JOURNAL 8 (3): 248–261. doi:10.1094/pbiomes-12-23-0132-r.
Vancouver
1.
Kaufmann M, Li L, Van Poucke C, Rhyner N, De Tender C, Uyttendaele M, et al. Soil type and associated microbiome influence chitin’s growth promotion effect in lettuce. PHYTOBIOMES JOURNAL. 2024;8(3):248–61.
IEEE
[1]
M. Kaufmann et al., “Soil type and associated microbiome influence chitin’s growth promotion effect in lettuce,” PHYTOBIOMES JOURNAL, vol. 8, no. 3, pp. 248–261, 2024.
@article{01JACVPSWK10YKYVZATMDZRS6D,
  abstract     = {{Chitin amendment of peat substrate has been proven effective in promoting lettuce growth and increasing phenolic compounds in lettuce seedlings. However, the effect of chitin soil amendment on lettuce growth in mineral soil remains unexplored. The effect of chitin amendment of mineral soil on lettuce growth and metabolite changes was investigated for the first time in the present study in comparison with chitin-amended peat substrate. Our findings showed that chitin addition in peat substrate increased lettuce head weight by approximately 50% at harvest, whereas this increase was 30% when chitin was added to mineral soil. Targeted metabolomics analysis indicated that chitin addition affected the phenolic compounds in lettuce seedlings, but this effect varied between soil types. Moreover, untargeted metabolomics analysis suggested that using peat substrate or mineral soil had a greater influence on produced lettuce metabolites than chitin addition. Rhizobiome analysis showed that specifically Mortierellaceae family members, known for chitin degradation and plant growth promotion, significantly increased in peat substrate upon chitin treatment. In mineral soil, three bacterial genera and five fungi, including known plant-growth-promoting genera, were significantly more abundant upon chitin treatment but Mortierellaceae family members were not. We assume that the observed effects primarily stem from soil characteristics and from chitin-induced alterations in rhizobiome composition, particularly the presence of Mortierellaceae members, leading to promoted lettuce growth. Despite the variability, chitin remains an environmentally friendly alternative to synthetic fertilizers in lettuce production, but its beneficial effects are dependent on rhizobiome composition, which should be considered before chitin application.}},
  author       = {{Kaufmann, Moritz and Li, Leilei and Van Poucke, Christof and Rhyner, Nicola and De Tender, Caroline and Uyttendaele, Mieke and Heyndrickx, Marc and Zipfel, Cyril and Pothier, Joël F. and Cottyn, Bart}},
  issn         = {{2471-2906}},
  journal      = {{PHYTOBIOMES JOURNAL}},
  keywords     = {{chitin,microbiome,growth promotion,lettuce,metabarcoding,metabolomics,BIOCONTROL AGENT,AGRICULTURE,SILVA}},
  language     = {{eng}},
  number       = {{3}},
  pages        = {{248--261}},
  title        = {{Soil type and associated microbiome influence chitin's growth promotion effect in lettuce}},
  url          = {{http://doi.org/10.1094/pbiomes-12-23-0132-r}},
  volume       = {{8}},
  year         = {{2024}},
}

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