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Potential of globally distributed topsoil mid-infrared spectral library for organic carbon estimation

(2024) CATENA. 235.
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Abstract
Accurate monitoring of soil organic carbon (SOC) is critical for sustainable management of soil for improving its quality, function, and carbon sequestration. As a nondestructive, efficient, and low-cost technique, mid-infrared (MIR) spectroscopy has shown a great potential in rapid estimation of SOC, despite limited studies of the global scale. The objective of this work was to use a globally distributed topsoil MIR spectral library with 33,039 samples to predict SOC using different modeling methods. Effects of nine fractional-order derivatives (FODs) on the predicted accuracy of SOC were evaluated using four regression algorithms (i.e., ratio index-based linear regression, RI-LR; partial least squares regression, PLSR; Cubist; convolutional neural network, CNN). Squareroot transformation to SOC data was performed to minimize the skewness and non-linearity. Results indicated FOD to capture the subtle spectral details related to SOC, leading to improved predictions that may not be possible by the raw absorbance and common integer-order derivatives. Concerning the RI-LR models, the optimal validation result for SOC was obtained by 0.75-order derivative, with the ratio of performance to inter-quartile distance (RPIQ) of 1.85. Regarding the full-spectrum modeling for SOC, the CNN outperformed PLSR and Cubist models, irrespective of raw absorbance or eight FODs; the best-performing CNN model was achieved by 1.25order derivative (validation RPIQ = 6.33). It can be concluded that accurate estimation of SOC using large and diverse MIR spectral library at the global scale combined with deep-learning CNN model is feasible. This global-scale database is extremely valuable for us to deal with the shortage of soil data and to monitor the soils at different geographical scales.
Keywords
Soil monitoring, Mid-infrared spectroscopy, Soil spectral library, Fractional-order derivative, Deep learning, NEAR-INFRARED SPECTROSCOPY, LEAST-SQUARES REGRESSION, REFLECTANCE SPECTROSCOPY, SOIL PROPERTIES, PREDICTION, MATTER, CALIBRATION, DIFFERENTIATION, PERFORMANCE, INDICATORS

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MLA
Hong, Yongsheng, et al. “Potential of Globally Distributed Topsoil Mid-Infrared Spectral Library for Organic Carbon Estimation.” CATENA, vol. 235, 2024, doi:10.1016/j.catena.2023.107628.
APA
Hong, Y., Sanderman, J., Hengl, T., Chen, S., Wang, N., Xue, J., … Shi, Z. (2024). Potential of globally distributed topsoil mid-infrared spectral library for organic carbon estimation. CATENA, 235. https://doi.org/10.1016/j.catena.2023.107628
Chicago author-date
Hong, Yongsheng, Jonathan Sanderman, Tomislav Hengl, Songchao Chen, Nan Wang, Jie Xue, Zhiqing Zhuo, et al. 2024. “Potential of Globally Distributed Topsoil Mid-Infrared Spectral Library for Organic Carbon Estimation.” CATENA 235. https://doi.org/10.1016/j.catena.2023.107628.
Chicago author-date (all authors)
Hong, Yongsheng, Jonathan Sanderman, Tomislav Hengl, Songchao Chen, Nan Wang, Jie Xue, Zhiqing Zhuo, Jie Peng, Shuo Li, Yiyun Chen, Yaolin Liu, Abdul Mouazen, and Zhou Shi. 2024. “Potential of Globally Distributed Topsoil Mid-Infrared Spectral Library for Organic Carbon Estimation.” CATENA 235. doi:10.1016/j.catena.2023.107628.
Vancouver
1.
Hong Y, Sanderman J, Hengl T, Chen S, Wang N, Xue J, et al. Potential of globally distributed topsoil mid-infrared spectral library for organic carbon estimation. CATENA. 2024;235.
IEEE
[1]
Y. Hong et al., “Potential of globally distributed topsoil mid-infrared spectral library for organic carbon estimation,” CATENA, vol. 235, 2024.
@article{01HFP0G1R3CG1JFK41P0GSQGY7,
  abstract     = {{Accurate monitoring of soil organic carbon (SOC) is critical for sustainable management of soil for improving its quality, function, and carbon sequestration. As a nondestructive, efficient, and low-cost technique, mid-infrared (MIR) spectroscopy has shown a great potential in rapid estimation of SOC, despite limited studies of the global scale. The objective of this work was to use a globally distributed topsoil MIR spectral library with 33,039 samples to predict SOC using different modeling methods. Effects of nine fractional-order derivatives (FODs) on the predicted accuracy of SOC were evaluated using four regression algorithms (i.e., ratio index-based linear regression, RI-LR; partial least squares regression, PLSR; Cubist; convolutional neural network, CNN). Squareroot transformation to SOC data was performed to minimize the skewness and non-linearity. Results indicated FOD to capture the subtle spectral details related to SOC, leading to improved predictions that may not be possible by the raw absorbance and common integer-order derivatives. Concerning the RI-LR models, the optimal validation result for SOC was obtained by 0.75-order derivative, with the ratio of performance to inter-quartile distance (RPIQ) of 1.85. Regarding the full-spectrum modeling for SOC, the CNN outperformed PLSR and Cubist models, irrespective of raw absorbance or eight FODs; the best-performing CNN model was achieved by 1.25order derivative (validation RPIQ = 6.33). It can be concluded that accurate estimation of SOC using large and diverse MIR spectral library at the global scale combined with deep-learning CNN model is feasible. This global-scale database is extremely valuable for us to deal with the shortage of soil data and to monitor the soils at different geographical scales.}},
  articleno    = {{107628}},
  author       = {{Hong, Yongsheng and Sanderman, Jonathan and Hengl, Tomislav and Chen, Songchao and Wang, Nan and Xue, Jie and Zhuo, Zhiqing and Peng, Jie and Li, Shuo and Chen, Yiyun and Liu, Yaolin and Mouazen, Abdul and Shi, Zhou}},
  issn         = {{0341-8162}},
  journal      = {{CATENA}},
  keywords     = {{Soil monitoring,Mid-infrared spectroscopy,Soil spectral library,Fractional-order derivative,Deep learning,NEAR-INFRARED SPECTROSCOPY,LEAST-SQUARES REGRESSION,REFLECTANCE SPECTROSCOPY,SOIL PROPERTIES,PREDICTION,MATTER,CALIBRATION,DIFFERENTIATION,PERFORMANCE,INDICATORS}},
  language     = {{eng}},
  pages        = {{14}},
  title        = {{Potential of globally distributed topsoil mid-infrared spectral library for organic carbon estimation}},
  url          = {{http://doi.org/10.1016/j.catena.2023.107628}},
  volume       = {{235}},
  year         = {{2024}},
}

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