Academic Bibliography

Search 200 years of publications by Ghent University researchers.

Hengchi Chen

Faculty of Sciences > Department of Plant Biotechnology and Bioinformatics

ORCID iD: 0000-0003-1173-6622

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- Journal Article
- A1
- open access
Comparative transcriptomics in ferns reveals key innovations and divergent evolution of the secondary cell walls

Zahin Ali, Qiao Wen Tan, Peng Ken Lim, Hengchi Chen (UGent) , Lukas Pfeifer, Irene Julca, Jia Min Lee, Birgit Classen, Sophie de Vries, Jan de Vries, et al.

(2025) NATURE PLANTS.
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- Journal Article
- A1
- open access
SOI : robust identification of orthologous synteny with the Orthology Index and broad applications in evolutionary genomics

Ren-Gang Zhang, Hong-Yun Shang, Richard Ian Milne, Fabricio De Almeida Silva (UGent) , Hengchi Chen (UGent) , Min-Jie Zhou, Heng Shu, Kai-Hua Jia, Yves Van de Peer (UGent) and Yong-Peng Ma

(2025) NUCLEIC ACIDS RESEARCH. 53(7).
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- PhD Thesis
Inference and evolutionary significance of ancient polyploidy in plants

Hengchi Chen (UGent)

(2025)
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- Journal Article
- A1
- open access
wgd v2 : a suite of tools to uncover and date ancient polyploidy and whole-genome duplication

Hengchi Chen (UGent) , Arthur Zwaenepoel and Yves Van de Peer (UGent)

(2024) BIOINFORMATICS. 40(5).
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- Book Chapter
Inference of ancient polyploidy from genomic data

Hengchi Chen (UGent) and Arthur Zwaenepoel

(2023) Polyploidy : methods and protocols. In Methods in Molecular Biology 2545. p.3-18
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- Journal Article
- A1
- open access
Revisiting ancient polyploidy in leptosporangiate ferns

Hengchi Chen (UGent) , Yuhan Fang, Arthur Zwaenepoel, Sanwen Huang, Yves Van de Peer (UGent) and Zhen Li (UGent)

(2023) NEW PHYTOLOGIST. 237(4). p.1405-1417
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- Journal Article
- A1
- open access
The genome of homosporous maidenhair fern sheds light on the euphyllophyte evolution and defences

Yuhan Fang, Xing Qin, Qinggang Liao, Ran Du, Xizhi Luo, Qian Zhou, Zhen Li (UGent) , Hengchi Chen (UGent) , Wanting Jin, Yaning Yuan, et al.

(2022) NATURE PLANTS. 8(9). p.1024-1037