Academic Bibliography

Search 200 years of publications by Ghent University researchers.

prof. dr. Bart Mesuere

Faculty of Sciences > Department of Mathematics, Computer Science and Statistics

ORCID iD: 0000-0003-0610-3441

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Classification of collagens via peptide ambiguation, in a paleoproteomic LC-MS/MS-based taxonomic pipeline

Ian Engels (UGent) , Alexandra Burnett (UGent) , Prudence Robert (UGent) , Camille Pironneau (UGent) , Grégory Abrams (UGent) , Robbin Bouwmeester (UGent) , Peter Van Der Plaetsen, Kévin Di Modica, Marcel Otte, Lawrence Guy Straus, et al.

(2025) JOURNAL OF PROTEOME RESEARCH. 24(4). p.1907-1925
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- Journal Article
- A1
- open access
The microbiologist's guide to metaproteomics

Tim Van Den Bossche (UGent) , Jean Armengaud, Dirk Benndorf, Jose Alfredo Blakeley‐Ruiz, Madita Brauer, Kai Cheng, Marybeth Creskey, Daniel Figeys, Lucia Grenga, Timothy J. Griffin, et al.

(2025) IMETA.
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- Miscellaneous
Direct construction of sparse suffix arrays with Libsais

Simon Van de Vyver (UGent) , Tibo Vande Moortele (UGent) , Peter Dawyndt (UGent) , Bart Mesuere (UGent) and Pieter Verschaffelt (UGent)

(2025)
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- Miscellaneous
- open access
The microbiologist’s guide to metaproteomics

Tim Van Den Bossche (UGent) , Jean Armengaud, Dirk Benndorf, Jose Alfredo Blakeley-Ruiz, Madita Brauer, Kai Cheng, Marybeth Creskey, Daniel Figeys, Lucia Grenga, Timothy J Griffin, et al.

(2025) ChemRxiv.
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- Journal Article
- A1
- open access
PathwayPilot : a user-friendly tool for visualizing and navigating metabolic pathways

Tibo Vande Moortele (UGent) , Pieter Verschaffelt (UGent) , Qingyao Huang, Nadezhda T. Doncheva, Tanja Holstein (UGent) , Caroline Jachmann (UGent) , Peter Dawyndt (UGent) , Lennart Martens (UGent) , Bart Mesuere (UGent) and Tim Van Den Bossche (UGent)

(2025) MOLECULAR & CELLULAR PROTEOMICS. 24(3).
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Unipept in 2024 : expanding metaproteomics analysis with support for missed cleavages and semitryptic and nontryptic peptides

Tibo Vande Moortele (UGent) , Bram Devlaminck, Simon Van de Vyver (UGent) , Tim Van Den Bossche (UGent) , Lennart Martens (UGent) , Peter Dawyndt (UGent) , Bart Mesuere (UGent) and Pieter Verschaffelt (UGent)

(2025) JOURNAL OF PROTEOME RESEARCH. 24(2). p.949-954
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- Miscellaneous
The Peptonizer2000 : bringing confidence to metaproteomics

Tanja Holstein (UGent) , Pieter Verschaffelt (UGent) , Tim Van Den Bossche (UGent) , Simon Van de Vyver (UGent) , Lennart Martens (UGent) , Bart Mesuere (UGent) and Thilo Muth

(2024) bioRxiv.
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- Miscellaneous
- open access
ClassiCOL : LC-MS/MS analysis for ancient species classification via collagen peptide ambiguation

Ian Engels (UGent) , Alexandra Burnett (UGent) , Prudence Robert, Camille Pironneau (UGent) , Grégory Abrams (UGent) , Robbin Bouwmeester (UGent) , Peter Van Der Plaetsen, Kevin Di Modica, Marcel Otte, Lawrence Guy Straus, et al.

(2024) BIORXIV.
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- Book Chapter
Biodiversity analysis of metaproteomics samples with Unipept : a comprehensive tutorial

Tim Van Den Bossche (UGent) , Pieter Verschaffelt (UGent) , Tibo Vande Moortele (UGent) , Peter Dawyndt (UGent) , Lennart Martens (UGent) and Bart Mesuere (UGent)

(2024) Protein bioinformatics. In Methods in Molecular Biology 2836. p.183-215
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- Miscellaneous
PathwayPilot : a user-friendly tool for visualizing and navigating metabolic pathways

Tibo Vande Moortele (UGent) , Pieter Verschaffelt (UGent) , Qingyao Huang, Nadezhda T. Doncheva, Tanja Holstein (UGent) , Caroline Jachmann (UGent) , Peter Dawyndt (UGent) , Lennart Martens (UGent) , Bart Mesuere (UGent) and Tim Van Den Bossche (UGent)

(2024) BIORXIV.

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