Academic Bibliography

Search 200 years of publications by Ghent University researchers.

prof. dr. ir. Jan Fostier

Faculty of Engineering and Architecture > Department of Information technology

ORCID iD: 0000-0002-9994-8269

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Oracle selection provides insight into how far off practice is from Utopia in plant breeding

David Vanavermaete (UGent) , Steven Maenhout (UGent) , Jan Fostier (UGent) and Bernard De Baets (UGent)

(2023) FRONTIERS IN PLANT SCIENCE. 14.
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Improved node and arc multiplicity estimation in de Bruijn graphs using approximate inference in conditional random fields

Aranka Steyaert (UGent) , P. Audenaert (UGent) and Jan Fostier (UGent)

(2023) IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS. 20(3). p.1995-2006
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Approximate pattern matching using search schemes and in-text verification

Luca Renders (UGent) , Lore Depuydt (UGent) and Jan Fostier (UGent)

(2022) Faculty of Engineering and Architecture Research Symposium 2022 (FEARS 2022), Abstracts.
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BLSSpeller to discover novel regulatory motifs in maize

Razgar Seyed Rahmani (UGent) , Dries Decap (UGent) , Jan Fostier (UGent) and Kathleen Marchal (UGent)

(2022) DNA RESEARCH. 29(4).
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Adaptive scoping : balancing short- and long-term genetic gain in plant breeding

David Vanavermaete (UGent) , Jan Fostier (UGent) , Steven Maenhout (UGent) and Bernard De Baets (UGent)

(2022) EUPHYTICA. 218(8).
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Approximate pattern matching using search schemes and in-text verification

Luca Renders (UGent) , Lore Depuydt (UGent) and Jan Fostier (UGent)

(2022) BIOINFORMATICS AND BIOMEDICAL ENGINEERING, PT II. In Lecture notes in computer science 13347. p.419-435
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Halvade somatic : somatic variant calling with Apache Spark

Dries Decap (UGent) , Louise de Schaetzen van Brienen (UGent) , Maarten Larmuseau (UGent) , Pascal Costanza, Charlotte Herzeel, Roel Wuyts, Kathleen Marchal (UGent) and Jan Fostier (UGent)

(2022) GIGASCIENCE. 11.
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Dynamic partitioning of search patterns for approximate pattern matching using search schemes

Luca Renders (UGent) , Kathleen Marchal (UGent) and Jan Fostier (UGent)

(2021) ISCIENCE. 24(7).
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Deep scoping : a breeding strategy to preserve, reintroduce and exploit genetic variation

David Vanavermaete (UGent) , Jan Fostier (UGent) , Steven Maenhout (UGent) and Bernard De Baets (UGent)

(2021) THEORETICAL AND APPLIED GENETICS. 134(12). p.3845-3861
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Multithreaded variant calling in elPrep 5

Charlotte Herzeel, Pascal Costanza, Dries Decap (UGent) , Jan Fostier (UGent) , Roel Wuyts and Wilfried Verachtert

(2021) PLOS ONE. 16(2).

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