Academic Bibliography

Search 200 years of publications by Ghent University researchers.

prof. dr. ir. Katleen De Preter

Faculty of Medicine and Health Sciences > Department of Biomolecular Medicine

ORCID iD: 0000-0002-7726-5096

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- Miscellaneous
A benchmark of DNA methylation deconvolution methods for tumoral fraction estimation using DecoNFlow

Edoardo Giuili (UGent) , Sofie Van de Velde (UGent) , Sam Kint (UGent) , Maísa Renata Ferro Dos Santos (UGent) , Lotte Cornelli (UGent) , Sofie Roelandt (UGent) , Kathleen Schoofs (UGent) , Renske Imschoot (UGent) , Ruben Van Paemel (UGent) , Leander Meuris (UGent) , et al.

(2025)
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- Journal Article
- A1
- open access
Blood collection tube and RNA purification method recommendations for extracellular RNA transcriptome profiling

The exRNAQC Consortium, Jasper Anckaert (UGent) , Francisco Avila Cobos (UGent) , Anneleen Decock (UGent) , Philippe Decruyenaere (UGent) , Jill Deleu (UGent) , Katleen De Preter (UGent) , Olivier De Wever (UGent) , Jilke De Wilde (UGent) , Bert Dhondt, et al.

(2025) NATURE COMMUNICATIONS. 16(1).
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- Journal Article
- A1
- open access
Therapy response monitoring in blood plasma from esophageal adenocarcinoma patients using cell-free DNA methylation profiling

Kathleen Schoofs (UGent) , Maísa Renata Ferro Dos Santos (UGent) , Jilke De Wilde (UGent) , Sofie Roelandt (UGent) , Sofie Van de Velde (UGent) , Philippe Decruyenaere (UGent) , Leander Meuris (UGent) , Olivier Thas (UGent) , Annouck Philippron, Lieven Depypere, et al.

(2024) SCIENTIFIC REPORTS. 14(1).
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- Journal Article
- A1
- open access
Defining the optimal setting for transcriptomic analyses on blood samples for response prediction in immunotherapy-treated NSCLC patients

Alvaro Marcos Rubio (UGent) , Seoyeon Oh (UGent) , Sofie Roelandt (UGent) , Dieter Stevens (UGent) , Eufra Van Damme (UGent) , Karim Vermaelen (UGent) , Katleen De Preter (UGent) and Celine Everaert (UGent)

(2024) SCIENTIFIC REPORTS. 14(1).
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- Journal Article
- A1
- open access
Diagnosis of pediatric central nervous system tumors using methylation profiling of cfDNA from cerebrospinal fluid

Lotte Cornelli (UGent) , Ruben Van Paemel (UGent) , Maísa Renata Ferro Dos Santos (UGent) , Sofie Roelandt (UGent) , Leen Willems (UGent) , Jelle Vandersteene (UGent) , Edward Baert (UGent) , Liselot Mus (UGent) , Nadine Van Roy (UGent) , Bram De Wilde (UGent) , et al.

(2024) CLINICAL EPIGENETICS. 16(1).
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- Journal Article
- A1
- open access
NBAtlas : a harmonized single-cell transcriptomic reference atlas of human neuroblastoma tumors

Noah Bonine (UGent) , Vittorio Zanzani (UGent) , Annelies Van Hemelryk (UGent) , Bavo Vanneste (UGent) , Christian Zwicker (UGent) , Tinne Thoné (UGent) , Sofie Roelandt (UGent) , Sarah-Lee Bekaert (UGent) , Jan Koster, Isabelle Janoueix-Lerosey, et al.

(2024) CELL REPORTS. 43(10).
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A fast, affordable and minimally-invasive diagnostic test for Cancer of Unknown Primary (CUP) using DNA methylation profiling

Jilke De Wilde (UGent) , Ruben Van Paemel (UGent) , Andries De Koker (UGent) , Sofie Roelandt (UGent) , Sofie Van de Velde (UGent) , Nico Callewaert (UGent) , Jo Van Dorpe (UGent) , David Creytens (UGent) , Bram De Wilde (UGent) and Katleen De Preter (UGent)

(2024) LABORATORY INVESTIGATION. 104(8).
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- Journal Article
- A1
- open access
Computational deconvolution of DNA methylation data from mixed DNA samples

Maísa Renata Ferro Dos Santos (UGent) , Edoardo Giuili (UGent) , Andries De Koker (UGent) , Celine Everaert (UGent) and Katleen De Preter (UGent)

(2024) BRIEFINGS IN INFORMATICS. 25(3).
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- Journal Article
- A1
- open access
Human iPSC modeling recapitulates in vivo sympathoadrenal development and reveals an aberrant developmental subpopulation in familial neuroblastoma

Stéphane Van Haver, Yujie Fan, Sarah-Lee Bekaert (UGent) , Celine Everaert (UGent) , Wouter Van Loocke (UGent) , Vittorio Zanzani (UGent) , Joke Deschildre, Ines Fernandez Maestre, Adrianna Amaro, Vanessa Vermeirssen (UGent) , et al.

(2024) ISCIENCE. 27(1).
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- Journal Article
- A1
- open access
Evaluation of single-sample network inference methods for precision oncology

Joke Deschildre, Boris Vandemoortele (UGent) , Jens Uwe Loers (UGent) , Katleen De Preter (UGent) and Vanessa Vermeirssen (UGent)

(2024) NPJ SYSTEMS BIOLOGY AND APPLICATIONS. 10(1).

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