Academic Bibliography

Search 200 years of publications by Ghent University researchers.

Robbe Devreese

Faculty of Medicine and Health Sciences > Department of Biomolecular Medicine

ORCID iD: 0000-0002-3432-1502

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Koina : democratizing machine learning for proteomics research

Ludwig Lautenbacher, Kevin L. Yang, Tobias Kockmann, Christian Panse, Wassim Gabriel, Dulguun Bold, Elias Kahl, Matthew Chambers, Brendan X. MacLean, Kai Li, et al.

(2025) NATURE COMMUNICATIONS. 16(1).
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Collisional cross-section prediction for multiconformational peptide ions with IM2Deep

Robbe Devreese (UGent) , Alireza Nameni (UGent) , Arthur Declercq (UGent) , Emmy Terryn, Ralf Gabriels (UGent) , Francis Impens (UGent) , Kris Gevaert (UGent) , Lennart Martens (UGent) and Robbin Bouwmeester (UGent)

(2025) ANALYTICAL CHEMISTRY. 97(28). p.15113-15121
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Maximizing immunopeptidomics-based bacterial epitope discovery by multiple search engines and rescoring

Patrick Willems (UGent) , Fabien Henri Thery (UGent) , Laura Van Moortel (UGent) , Margaux De Meyer (UGent) , An Staes (UGent) , Adillah Gul (UGent) , Lyudmila Kovalchuke (UGent) , Arthur Declercq (UGent) , Robbe Devreese (UGent) , Robbin Bouwmeester (UGent) , et al.

(2025) JOURNAL OF PROTEOME RESEARCH. 24(4). p.2141-2151
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TIMS2Rescore : a data dependent acquisition-parallel accumulation and serial fragmentation-optimized data-driven rescoring pipeline based on MS2Rescore

Arthur Declercq (UGent) , Robbe Devreese (UGent) , Jonas Scheid, Caroline Jachmann (UGent) , Tim Van Den Bossche (UGent) , Annica Preikschat, David Gomez-Zepeda, Jeewan Babu Rijal, Aurelie Hirschler, Jonathan R. Krieger, et al.

(2025) JOURNAL OF PROTEOME RESEARCH. 24(3). p.1067-1076