- ORCID iD
- 0000-0001-7772-4259
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- Journal Article
- A1
- open access
Human iPSC modeling recapitulates in vivo sympathoadrenal development and reveals an aberrant developmental subpopulation in familial neuroblastoma
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Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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- Conference Paper
- C3
- open access
Dramatic impact of blood collection tube and RNA purification method on extracellular RNA transcriptomes
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- Miscellaneous
- open access
Patient-specific alterations in blood plasma cfRNA profiles enable accurate classification of cancer patients and controls
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- Journal Article
- A1
- open access
Circulating immune cell dynamics as outcome predictors for immunotherapy in non-small cell lung cancer
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Pan-cancer blood plasma cell-free RNA profiles reveal cancer type and patient-specific changes
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- Journal Article
- A1
- open access
Blocking abundant RNA transcripts by high-affinity oligonucleotides during transcriptome library preparation
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Whole transcriptome profiling of liquid biopsies from tumour xenografted mouse models enables specific monitoring of tumour-derived extracellular RNA
(2023) -
Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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- Journal Article
- A2
- open access
Longitudinal evaluation of serum microRNAs as biomarkers for neuroblastoma burden and therapeutic p53 reactivation
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Exploration of neuroblastoma xenograft models for tumor extracellular RNA profiling in murine blood plasma
(2022) -
The Extracellular RNA Quality Control (exRNAQC) study (phase 2)
(2022) -
The Extracellular RNA Quality Control (exRNAQC) study (phase 1)
(2022) -
Whole transcriptome profiling of liquid biopsies from tumor xenografted mouse models enables specific monitoring of tumor-derived RNA
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Whole transcriptome profiling of liquid biopsies from tumor xenografted mouse models enables specific monitoring of tumor-derived RNA
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- Miscellaneous
- open access
Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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Complementarity of single-nucleus and single-cell RNA sequencing to study the transcriptional heterogeneity of neuroblastoma tumors
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- Journal Article
- A2
- open access
Whole transcriptome profiling of liquid biopsies from tumour xenografted mouse models enables specific monitoring of tumour-derived extracellular RNA
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A 3′‐end capture sequencing method for high‐throughput targeted gene expression profiling
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- Miscellaneous
- open access
Blocking unwanted sequences by target specific high-affinity binding oligonucleotides during transcriptome library preparation
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The adrenergic-specific long non-coding RNA NESPR controls survival of neuroblastoma cells
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Complementarity of single-nucleus and single-cell RNA sequencing to study the transcriptional heterogeneity of neuroblastoma tumors
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- Journal Article
- A2
- open access
CiLiQuant : quantification of RNA junction reads based on their circular or linear transcript origin
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Substantial performance differences among RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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Whole transcriptome profiling of liquid biopsies from tumor xenografted mouse models enables specific monitoring of tumor-derived RNA
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Whole transcriptome profiling of liquid biopsies from tumor xenografted mouse models enables specific monitoring of tumor-derived RNA
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Substantial performance differences among RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
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- Journal Article
- A2
- open access
Messenger RNA capture sequencing of extracellular RNA from human biofluids using a comprehensive set of spike-in controls
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- Journal Article
- A1
- open access
Custom long non-coding RNA capture enhances detection sensitivity in different human sample types
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Whole transcriptome profiling of liquid biopsies from tumor xenografted mouse models enables specific monitoring of tumor-derived RNA
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- Journal Article
- A2
- open access
Imaging-AMARETTO : an imaging genomics software tool to interrogate multiomics networks for relevance to radiography and histopathology imaging biomarkers of clinical outcomes
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Substantial performance differences among RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control study-important considerations for liquid biopsies
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Performance assessment of total RNA sequencing of human biofluids and extracellular vesicles
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- Journal Article
- A1
- open access
SPECS: a non-parametric method to identify tissue-specific molecular features for unbalanced sample groups
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- PhD Thesis
- open access
Development of extracellular RNA sequencing technologies and applications for cancer diagnosis and monitoring
(2020) -
Whole transcriptome profiling of liquid biopsies from patient-derived xenograft (PDX) models
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- Journal Article
- A1
- open access
Performance assessment of total RNA sequencing of human biofluids and extracellular vesicles
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- Journal Article
- A1
- open access
The long noncoding RNA lncNB1 promotes tumorigenesis by interacting with ribosomal protein RPL35
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- Conference Paper
- C3
- open access
Evaluating the impact of RNA purification kit and blood collection tube in the extracellular RNA quality control study : important considerations for liquid biopsies
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- Conference Paper
- C3
- open access
Dramatic differences in RNA purification kit performance in the extracellular RNA quality control study : important considerations for liquid biopsies
-
- Conference Paper
- C3
- open access
Dramatic differences in RNA purification kit performance in the extracellular RNA quality control study : important considerations for liquid biopsies
-
- Miscellaneous
- open access
SPECS : a non-parameteric method to identify tissue-specific molecular features for unbalanced sample groups
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Combined analysis of metabolomes, proteomes, and transcriptomes of hepatitis C virus-infected cells and liver to identify pathways associated with disease development
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- Journal Article
- A2
- open access
TFutils : data structures for transcription factor bioinformatics
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- Journal Article
- A1
- open access
SMARTer single cell total RNA-sequencing
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- Journal Article
- A1
- open access
Integrative analysis identifies lincRNAs up- and downstream of neuroblastoma driver genes
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- Conference Paper
- C3
- open access
SMARTer single cell total RNA sequencing
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Long noncoding RNA expression profiling in cancer : challenges and opportunities
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The extracellular RNA quality control (exRNAQC) study : controlling pre-analytical variables of RNA sequencing in blood-based precision medicine
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The neuroblastoma-specific lncRNA NESPR activates PHOX2B expression and is essential for neuroblastoma cell survival
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- Journal Article
- A1
- open access
Differential gene expression analysis tools exhibit substandard performance for long non-coding RNA-sequencing data
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Longitudinal evaluation of murine serum microRNAs as biomarkers for neuroblastoma burden and therapeutic TP53 reactivation
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- Journal Article
- A2
- open access
Detecting long non-coding RNA biomarkers in prostate cancer liquid biopsies : hype or hope?
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Zipper plot : visualizing transcriptional activity of genomic regions
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The extracellular RNA quality control (exRNAQC) study : controlling pre-analytical variables of RNA sequencing in blood-based precision medicine
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Pancreatic cancer : hope to improve prognosis through thorough analysis of DNA and RNA biomarkers for detection and therapy monitoring in liquid biopsies
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- Journal Article
- A1
- open access
Benchmarking of RNA-sequencing analysis workflows using whole-transcriptome RT-qPCR expression data
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- Journal Article
- A1
- open access
Zipper plot : visualizing transcriptional activity of genomic regions
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PAN-cancer identification of ncRNAs with a high therapeutic and diagnostic potential
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- Journal Article
- A1
- open access
The transcriptome of lung tumor-infiltrating dendritic cells reveals a tumor-supporting phenotype and a microRNA signature with negative impact on clinical outcome
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PAN-cancer identification of ncRNAs with a high therapeutic and diagnostic potential
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PAN-cancer therapeutic target identification by omics data integration
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PAN-cancer identification of ncRNAs with a high therapeutic and diagnostic potential
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- Journal Article
- A1
- open access
Depletion of tRNA-halves enables effective small RNA sequencing of low-input murine serum samples
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Identification of non-invasive biomarkers for treatment response in neuroblastoma by circulating miRNA profiling
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Decoding cancer transcriptomes using public RNA sequencing data
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Dissecting the NOTCH1 driven transcriptional landscape in T-cell acute lymphoblastic leukemia at single cell level
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Benchmarking of RNA-sequencing analysis workflows using whole-transcriptome RT-qPCR expression data
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Decoding cancer transcriptomes using public RNA sequencing data
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Decoding cancer transcriptomes using public RNA sequencing data