Academic Bibliography

Search 200 years of publications by Ghent University researchers.

dr. Patrick Willems

Faculty of Medicine and Health Sciences > Department of Biomolecular Medicine

ORCID iD: 0000-0003-4667-2294

Add to list
- Journal Article
- A1
- open access
Scywalker : scalable end-to-end data analysis workflow for long-read single-cell transcriptome sequencing

Peter De Rijk, Tijs Watzeels, Fahri Küçükali, Jasper Van Dongen, Júlia Faura, Patrick Willems (UGent) , Lara De Deyn, Lena Duchateau, Carolin Grones, Thomas Eekhout (UGent) , et al.

(2024) BIOINFORMATICS. 40(9).
Add to list
- Journal Article
- A1
- open access
Immunopeptidomics mapping of Listeria monocytogenes T cell epitopes in mice

Adillah Gul (UGent) , Lecia L. Pewe, Patrick Willems (UGent) , Rupert Mayer (UGent) , Fabien Henri Thery (UGent) , Caroline Asselman (UGent) , Ilke Aernout (UGent) , Rein Verbeke (UGent) , Denzel Eggermont (UGent) , Laura Van Moortel (UGent) , et al.

(2024) MOLECULAR & CELLULAR PROTEOMICS. 23(9).
Add to list
- Journal Article
- A1
- open access
TermineR : extracting information on endogenous proteolytic processing from shotgun proteomics data

Miguel Cosenza‐Contreras, Adrianna Seredynska, Daniel Vogele, Niko Pinter, Eva Brombacher, Ruth Fiestas Cueto, Thien‐Ly Julia Dinh, Patrick Bernhard, Manuel Rogg, Junwei Liu, et al.

(2024) PROTEOMICS. 24(19).
Add to list
- Journal Article
- A1
- open access
The Plant PTM Viewer 2.0 : in-depth exploration of plant protein modification landscapes

Patrick Willems (UGent) , Lieven Sterck (UGent) , Avilien Dard (UGent) , Jingjing Huang (UGent) , Ive De Smet (UGent) , Kris Gevaert (UGent) and Frank Van Breusegem (UGent)

(2024) JOURNAL OF EXPERIMENTAL BOTANY. 75(15). p.4611-4624
Add to list
- Journal Article
- A1
- open access
CysQuant : simultaneous quantification of cysteine oxidation and protein abundance using data dependent or independent acquisition mass spectrometry

Jingjing Huang (UGent) , An Staes (UGent) , Francis Impens (UGent) , Vadim Demichev, Frank Van Breusegem (UGent) , Kris Gevaert (UGent) and Patrick Willems (UGent)

(2023) REDOX BIOLOGY. 67.
Add to list
- Journal Article
- A1
- open access
Interactome of Arabidopsis ATG5 suggests functions beyond autophagy

Pernilla H. Elander, Sanjana Holla, Igor Sabljić, Emilio Gutierrez-Beltran, Patrick Willems (UGent) , Peter V. Bozhkov and Elena A. Minina

(2023) INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 24(15).
Add to list
- Journal Article
- A1
- open access
Shift in vacuolar to cytosolic regime of infecting Salmonella from a dual proteome perspective

Ursula Fels, Patrick Willems (UGent) , Margaux De Meyer (UGent) , Kris Gevaert (UGent) and Petra Van Damme (UGent)

(2023) PLOS PATHOGENS. 19(8).
Add to list
- Journal Article
- A1
- open access
Mutation of Arabidopsis SME1 and Sm core assembly improves oxidative stress resilience

Patrick Willems (UGent) , Valerie Van Ruyskensvelde, Takanori Maruta (UGent) , Robin Pottie (UGent) , Álvaro Daniel Fernández Fernández, Jarne Pauwels (UGent) , Matthew A. Hannah, Kris Gevaert (UGent) , Frank Van Breusegem (UGent) and Katrien Van Der Kelen (UGent)

(2023) FREE RADICAL BIOLOGY AND MEDICINE. 200. p.117-129
Add to list
- Journal Article
- A1
- open access
Functionally annotating cysteine disulfides and metal binding sites in the plant kingdom using AlphaFold2 predicted structures

Patrick Willems (UGent) , Jingjing Huang (UGent) , Joris Messens and Frank Van Breusegem (UGent)

(2023) FREE RADICAL BIOLOGY AND MEDICINE. 194. p.220-229
Add to list
- Journal Article
- A1
- open access
Cysteine thiol–based post-translational modification : what do we know about transcription factors?

Heng Zhou, Jingjing Huang (UGent) , Patrick Willems (UGent) , Frank Van Breusegem (UGent) and Yanjie Xie

(2023) TRENDS IN PLANT SCIENCE. 28(4). p.415-428

1
2
3
4
5

Next →