Academic Bibliography

Search 200 years of publications by Ghent University researchers.

prof. dr. Bart Mesuere

Faculty of Sciences > Department of Mathematics, Computer Science and Statistics

ORCID iD: 0000-0003-0610-3441

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- Journal Article
- A1
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Integrating multi-omics technologies to decipher microbiome functions

Tim Van Den Bossche (UGent) , Eunice Adeline Lazau, Velma T. E. Aho, J. Alfredo Blakeley-Ruiz, Maximilian Wolf, Benoit Josef Kunath, Luis E. Valentin-Alvarado, Patrick Hellwig, Pieter Verschaffelt (UGent) , Andrew T. Rajczewski, et al.

(2026) NATURE COMMUNICATIONS. 17(1).
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- Miscellaneous
- open access
The Metaproteomics Initiative : five years of community-driven progress

Tim Van Den Bossche (UGent) , Lucia Grenga, Gelio Alves, Magnus Ø. Arntzen, Dirk Benndorf, Madita Brauer, Daniel Figeys, Celine Henry, Robert L. Hettich, Robert Heyer, et al.

(2026) MICROBIOME. 14(1).
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The need for standardization and improved open (meta)data practices in metaproteomics

Tim Van Den Bossche (UGent) , Maximilian Wolf, Jean Armengaud, Magnus Ø. Arntzen, Dirk Benndorf, Daniel Figeys, Lucia Grenga, Robert L. Hettich, Nithu Sara John, Pratik Jagtap, et al.

(2026) MICROBIOME. 14(1).
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Harnessing genomic and bioinformatics for surveillance of pathogens in Africa : a scoping review of existing training and gaps in training

Paul Tunde Kingpriest, John Bok, Palpouguini Lompo, Evodie Ngelesi, Joseph Mwaka, Sainabou Laye Ndure, Nyambura Moremi, Vito Baraka, Tim Van Den Bossche (UGent) , Sakina Bombaywala (UGent) , et al.

(2026) BMC INFECTIOUS DISEASES. 26(1).
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The Peptonizer2000 : bringing confidence to metaproteomics

Tanja Holstein (UGent) , Pieter Verschaffelt (UGent) , Tim Van Den Bossche (UGent) , Simon Van de Vyver (UGent) , Lennart Martens (UGent) , Bart Mesuere (UGent) and Thilo Muth

(2026) JOURNAL OF PROTEOME RESEARCH. 25(4). p.1831-1845
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Project ODIN : advancing environmental genomic surveillance for public health across sub-Saharan Africa

Bonny Baker, José Antonio Baz Lomba, Joseph Bitilinyu-Bangoh, Andreas Berglöf, Sakina Bombaywala (UGent) , Tracey Calvert-Joshua, Bérenger Kaboré, Paul Kingpriest, Trudie Lang, Joshua I Levy, et al.

(2026) LANCET MICROBE.
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Are LLMs good at answering student questions in CS1 courses?

Thomas Van Mullem (UGent) , Bart Mesuere (UGent) and Peter Dawyndt (UGent)

(2025) PROCEEDINGS OF THE 30TH ACM CONFERENCE ON INNOVATION AND TECHNOLOGY IN COMPUTER SCIENCE EDUCATION VOL 2, ITICSE 2025. p.780-780
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- Journal Article
- A1
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Direct construction of sparse suffix arrays with Libsais

Simon Van de Vyver (UGent) , Tibo Vande Moortele (UGent) , Peter Dawyndt (UGent) , Bart Mesuere (UGent) and Pieter Verschaffelt (UGent)

(2025) BMC BIOINFORMATICS. 26(1).
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Source code plagiarism detection as a service with Dolos

Rien Maertens (UGent) , Peter Dawyndt (UGent) and Bart Mesuere (UGent)

(2025) PROCEEDINGS OF THE 30TH ACM CONFERENCE ON INNOVATION AND TECHNOLOGY IN COMPUTER SCIENCE EDUCATION VOL 2, ITICSE 2025. p.729-730
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- Miscellaneous
- open access
Metaproteomics in the One Health framework for unraveling microbial effectors in microbiomes

Robert Heyer, Maximilian Wolf, Dirk Benndorf, Sergio Uzzau, Jana Seifert, Lucia Grenga, Martin Pabst, Heike Schmitt, Bart Mesuere (UGent) , Tim Van Den Bossche (UGent) , et al.

(2025) MICROBIOME. 13(1).

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