Sofie D'hondt

Journal Article
open access

Molecular fingerprints of cell size sensing and mating type differentiation in pennate diatoms

Darja Belišová (UGent) , Gust Bilcke (UGent) , Sien Audoor, Sofie D'hondt (UGent) , Lieven De Veylder (UGent) , Klaas Vandepoele (UGent) and Wim Vyverman (UGent)

(2025) New Phytologist.

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Asymmetric genome merging leads to gene expression novelty through nucleo‐cytoplasmic disruptions and transcriptomic shock in Chlamydomonas triploids

Lucas Prost (UGent) , Quinten Bafort (UGent) , Antoine Van de Vloet (UGent) , Fabricio De Almeida Silva (UGent) , Yunn Thet Paing (UGent) , Griet Casteleyn (UGent) , Sofie D'hondt (UGent) , Olivier De Clerck (UGent) and Yves Van de Peer (UGent)

(2025) NEW PHYTOLOGIST. 245(22). p.869-884

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Journal Article

Breaking free from references: a consensus-based approach for community profiling with long amplicon nanopore data

Willem Stock (UGent) , Coralie Rousseau, Glen Dierickx, Sofie D'hondt (UGent) , Luz Amadei Martínez (UGent) , Simon M. Dittami, Luna M. van der Loos and Olivier De Clerck (UGent)

(2024) BRIEFINGS IN BIOINFORMATICS. 26(1).

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DNA barcoding reveals an extensive number of cryptic introductions of bladed Bangiales (Rhodophyta) in the Southern North Sea

Jessica Knoop (UGent) , Silke Bouckenooghe (UGent) , Luna van der Loos (UGent) , Sofie D'hondt (UGent) , Mart Karremans, Frank Perk, Frederik Leliaert and Olivier De Clerck (UGent)

(2024) Frontiers in Marine Science. 11.

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Marine flora of French Polynesia : an updated list using DNA barcoding and traditional approaches

Christophe Vieira (UGent) , Myung Sook Kim, Antoine De Ramon N'Yeurt, Claude Payri, Sofie D'hondt (UGent) , Olivier De Clerck (UGent) and Mayalen Zubia

(2023) BIOLOGY-BASEL. 12(8).

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Tracing the introduction of Dictyota acutiloba (Dictyotales, Phaeophyceae) in the Mediterranean Sea, with a reassessment of its geographic distribution

Soria Delva, Camino Fernández de la Hoz, Quinten Bafort (UGent) , Sofie D'hondt (UGent) , Soha Shabaka, Sarah Hamdy Rashedy, Alison R. Sherwood, Tamar Guy-Haim, Alvaro Israel and Olivier De Clerck (UGent)

(2023) EUROPEAN JOURNAL OF PHYCOLOGY. 59(1). p.38-50

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Long-term phytoplankton dynamics in the Zeeschelde estuary (Belgium) are driven by the interactive effects of de-eutrophication, altered hydrodynam- ics and extreme weather events

Luz Amadei Martínez (UGent) , Koen Sabbe (UGent) , Renaat Dasseville (UGent) , Ilse Daveloose (UGent) , Tine Verstraete (UGent) , Sofie D'hondt (UGent) , Frédéric Azémar, Akoko Claudine Sossou, Micky Tackx, Tom Maris, et al.

(2023) SCIENCE OF THE TOTAL ENVIRONMENT. 860.

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Salinity and host drive Ulva-associated bacterial communities across the Atlantic–Baltic Sea gradient

Luna van der Loos (UGent) , Sofie D'hondt (UGent) , Aschwin H. Engelen, Henrik Pavia, Gunilla B. Toth, Anne Willems (UGent) , Florian Weinberger, Olivier De Clerck (UGent) and Sophie Steinhagen

(2023) MOLECULAR ECOLOGY. 32(23). p.6260-6277

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Phylogenetic position of Newhousia (Dictyotales, Phaeophyceae) and the description of N. sumayensis sp. nov. from Guam

Christophe Vieira (UGent) , Tom Schils, Hiroshi Kawai, Sofie D'hondt (UGent) , Monica O. Paiano, Alison R. Sherwood, Olivier De Clerck (UGent) and Mayalen Zubia

(2022) PHYCOLOGIA. 61(3). p.255-264

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Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction

Xiaojie Liu, Jonas Blomme (UGent) , Kenny Bogaert (UGent) , Sofie D'hondt (UGent) , Thomas Wichard, Dieter Deforce (UGent) , Filip Van Nieuwerburgh (UGent) and Olivier De Clerck (UGent)

(2022) BMC PLANT BIOLOGY. 22(1).

Academic Bibliography

Sofie D'hondt

Molecular fingerprints of cell size sensing and mating type differentiation in pennate diatoms

Asymmetric genome merging leads to gene expression novelty through nucleo‐cytoplasmic disruptions and transcriptomic shock in Chlamydomonas triploids

Breaking free from references: a consensus-based approach for community profiling with long amplicon nanopore data

DNA barcoding reveals an extensive number of cryptic introductions of bladed Bangiales (Rhodophyta) in the Southern North Sea

Marine flora of French Polynesia : an updated list using DNA barcoding and traditional approaches

Tracing the introduction of Dictyota acutiloba (Dictyotales, Phaeophyceae) in the Mediterranean Sea, with a reassessment of its geographic distribution

Long-term phytoplankton dynamics in the Zeeschelde estuary (Belgium) are driven by the interactive effects of de-eutrophication, altered hydrodynam- ics and extreme weather events

Salinity and host drive Ulva-associated bacterial communities across the Atlantic–Baltic Sea gradient

Phylogenetic position of Newhousia (Dictyotales, Phaeophyceae) and the description of N. sumayensis sp. nov. from Guam

Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction

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