Academic Bibliography

Search 200 years of publications by Ghent University researchers.

An Staes

Faculty of Medicine and Health Sciences > Department of Biomolecular Medicine

ORCID iD: 0000-0001-8767-8508

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- Journal Article
- A1
- open access
Data-independent immunopeptidomics discovery of low-abundant bacterial epitopes

Patrick Willems (UGent) , An Staes (UGent) , Laia Miret Casals (UGent) , Vadim Demichev, Simon Devos (UGent) and Francis Impens (UGent)

(2025) JOURNAL OF PROTEOME RESEARCH. 24(12). p.6295-6304
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Collecting and analysing pig mucosal scraping samples for mass spectrometry-based proteomics : a study on factors causing variation in proteomic data

Hanne De Rijcke (UGent) , An Staes (UGent) , Stefaan De Smet (UGent) , Marc Heyndrickx (UGent) , Sam Millet (UGent) , Leander Meuris (UGent) , Simon Devos (UGent) , Kris Gevaert (UGent) and Christof Van Poucke (UGent)

(2025) JOURNAL OF PROTEOMICS. 319.
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- Conference Paper
- C3
Design and evaluation of universal control antisense oligonucleotides across cellular models

Edith De Bruycker (UGent) , Manon Bouckaert (UGent) , Emma Delanote (UGent) , Leander Meuris (UGent) , Hanne Lenaerts (UGent) , Lode Denolf (UGent) , Katrien Remaut (UGent) , An Staes (UGent) , Kris Gevaert (UGent) , Steve Lefever (UGent) , et al.

(2025) Oligonucleotide Therapeutics Society, 21st Annual meeting, Abstracts.
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- Miscellaneous
Deconvoluting fiber type proportions from human skeletal muscle transcriptomics and proteomics data using FibeRtypeR

Thibaux Van der Stede (UGent) , Roger Moreno-Justicia, Freek Van de Casteele (UGent) , Eline Lievens (UGent) , Alexia Van de Loock (UGent) , Jonas Vandecauter (UGent) , Peter Merseburger, Jimmy Van den Eynden (UGent) , Delphi Van Haver (UGent) , An Staes (UGent) , et al.

(2025) BioRxiv.
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- Journal Article
- A1
- open access
Blood proteome profiling for biomarker discovery in broilers with necrotic enteritis

Svitlana Tretiak (UGent) , Teresa Maia (UGent) , Delphi Van Haver (UGent) , An Staes (UGent) , Simon Devos (UGent) , Tom Rijsselaere, Evy Goossens (UGent) , Filip Van Immerseel (UGent) , Francis Impens (UGent) and Gunther Antonissen (UGent)

(2025) SCIENTIFIC REPORTS. 15(1).
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- Journal Article
- A1
- open access
Maximizing immunopeptidomics-based bacterial epitope discovery by multiple search engines and rescoring

Patrick Willems (UGent) , Fabien Henri Thery (UGent) , Laura Van Moortel (UGent) , Margaux De Meyer (UGent) , An Staes (UGent) , Adillah Gul (UGent) , Lyudmila Kovalchuke (UGent) , Arthur Declercq (UGent) , Robbe Devreese (UGent) , Robbin Bouwmeester (UGent) , et al.

(2025) JOURNAL OF PROTEOME RESEARCH. 24(4). p.2141-2151
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- Journal Article
- A1
- open access
A multiyear longitudinal harmonization study of quality controls in mass spectrometry proteomics core facilities

Cristina Chiva, Roger Olivella, An Staes (UGent) , Teresa Maia (UGent) , Christian Panse, Karel Stejskal, Thibaut Douché, Bérangère Lombard, Andrea Schuhmann, Damarys Loew, et al.

(2025) JOURNAL OF PROTEOME RESEARCH. 24(2). p.397-409
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- PhD Thesis
- open access
Shifting mass spectrometry-based proteomics to the fast lane : an interplay between high throughput LC and data independent acquisition without compromising depth, precision or accuracy

An Staes (UGent)

(2024)
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An optimized protocol for pig intestinal mucosa proteomics

Hanne De Rijcke (UGent) , Kris Gevaert (UGent) , An Staes (UGent) , Stefaan De Smet (UGent) , Marc Heyndrickx (UGent) , Sam Millet and Christof Van Poucke

(2024) JOURNAL OF PROTEOMICS. 305.
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High-throughput nanoflow proteomics using a dual-column electrospray source

An Staes (UGent) , Katie Boucher (UGent) , Sara Dufour (UGent) , Teresa Maia (UGent) , Evy Timmerman (UGent) , Delphi Van Haver (UGent) , Jarne Pauwels (UGent) , Hans Demol (UGent) , Jonathan Vandenbussche (UGent) , Kris Gevaert (UGent) , et al.

(2024) ANALYTICAL CHEMISTRY. 96(17). p.6534-6539

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