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- 0000-0002-5581-7937
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A comparative genomic analysis of Fructobacillus evanidus sp. nov. from bumble bees
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- Journal Article
- A1
- open access
Various cold storage-backslopping cycles show the robustness of Limosilactobacillus fermentum IMDO 130101 as starter culture for Type 3 sourdough production
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- Journal Article
- A1
- open access
Microbial ecology and metabolite dynamics of backslopped triticale sourdough productions and the impact of scale
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The exploration of dominant spoilage bacteria in blue mussels (Mytilus edulis) stored under different modified atmospheres by MALDI-TOF MS in combination with 16S rRNA sequencing
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The importance of risk assessment for the use of microorganisms in the food and feed chains
(2023) -
Search for novel bacteria to valorize in the food industry - A culturomics approach
(2023) -
StrainInSight: a unique genome database to facilitate novel strain discovery for the food industry
(2023) -
StrainInSight: a unique private strain collection and innovative tools to facilitate novel strain discovery in the food and feed industry
(2023) -
Burkholderia, Stenotrophomonas, Ralstonia, Cupriavidus, Pandoraea, Brevundimonas, Comamonas, Delftia, and Acidovorax
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- Journal Article
- open access
A case study of the diet-microbiota-parasite interplay in bumble bees
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- Journal Article
- A1
- open access
Comparative genomic analysis of Periweissella and the characterization of novel motile species
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- Journal Article
- A1
- open access
The wild solitary bees Andrena vaga, Anthophora plumipes, Colletes cunicularius, and Osmia cornuta microbiota are host specific and dominated by endosymbionts and environmental microorganisms
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Potential for climate change driven spatial mismatches between apple crops and their wild bee pollinators at a continental scale
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- Journal Article
- A1
- open access
Intraspecific size shifts in generalist bumblebees and flowers lead to low functional consequences
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In vitro susceptibility of Achromobacter species isolated from cystic fibrosis patients : a 6-year survey
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- Journal Article
- A1
- open access
New insights into the role of key microorganisms and wooden barrels during lambic beer fermentation and maturation
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- Journal Article
- A1
- open access
Microbiota and pathogens in an invasive bee : Megachile sculpturalis from native and invaded regions
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- Journal Article
- A1
- open access
European bee diversity : taxonomic and phylogenetic patterns
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- Journal Article
- A1
- open access
Brytella acorum gen. nov., sp. nov., a novel acetic acid bacterium from sour beverages
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Aristophania vespae gen. nov., sp. nov., isolated from wasps, is related to Bombella and Oecophyllibacter, isolated from bees and ants
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- Journal Article
- A1
- open access
Convivina is a specialised core gut symbiont of the invasive hornet Vespa velutina
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- Journal Article
- A1
- open access
The GEN-ERA toolbox : unified and reproducible workflows for research in microbial genomics
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- Journal Article
- A1
- open access
Govania unica gen. nov., sp. nov., a rare biosphere bacterium that represents a novel family in the class Alphaproteobacteria
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- Journal Article
- A2
- open access
A phylogenomic and comparative genomic analysis of Commensalibacter, a versatile insect symbiont
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Cyclitol metabolism is a central feature of Burkholderia leaf symbionts
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- Conference Paper
- C3
- open access
Isolation and preliminary characterisation of wild yeasts isolated from natural niches for non- and low alcoholic beer production
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In memoriam : Monique Gillis (1942 - 2022)
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Acetobacter vaccinii sp. nov., a novel acetic acid bacterium isolated from blueberry fruit (Vaccinium corymbosum L.)
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- Journal Article
- A2
- open access
Isolation, screening, identification and optimization of culture parameters to produce gamma-aminobutyric acid by Lactiplantibacillus pentosus R13, an isolate from ruoc (fermented shrimp paste)
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- Journal Article
- A1
- open access
A comprehensive investigation into the production of gamma-aminobutyric acid by Limosilactobacillus fermentum NG16, a tuna gut isolate
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A comparative analysis of crop pollinator survey methods along a large-scale climatic gradient
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- Journal Article
- A1
- open access
Introduction to the principles and methods underlying the recovery of metagenome-assembled genomes from metagenomic data
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- Journal Article
- A1
- open access
Ecological, environmental, and management data indicate apple production is driven by wild bee diversity and management practices
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The exploration of microbial profiles in blue mussels (Mytilus edulis) stored under different modified atmospheres
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- Journal Article
- A1
- open access
Campylobacter majalis sp. nov. and Campylobacter suis sp. nov., novel Campylobacter species isolated from porcine gastrointestinal mucosa
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Isolation and identification of a Bacillus sp. from freshwater sediment displaying potent activity against bacteria and phytopathogen fungi
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- Journal Article
- A1
- open access
Signals of adaptation to agricultural stress in the genomes of two European bumblebees
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- Journal Article
- A2
- open access
Microbial diversity and antimicrobial susceptibility in endotracheal tube biofilms recovered from mechanically ventilated COVID-19 patients
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- Journal Article
- A1
- open access
Phylogenomic analyses of Snodgrassella isolates from honeybees and bumblebees reveal taxonomic and functional diversity
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- Journal Article
- A1
- open access
Backslopping time, rinsing of the grains during backslopping, and incubation temperature influence the water kefir fermentation process
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- Journal Article
- A1
- open access
Accurate prediction of metagenome-assembled genome completeness by MAGISTA, a random forest model built on alignment-free intra-bin statistics
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Paraburkholderia gardini sp. nov. and Paraburkholderia saeva sp. nov. : novel aromatic compound degrading bacteria isolated from garden and forest soil samples
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- Journal Article
- A1
- open access
Description of Pseudoclavibacter triregionum sp. nov. from human blood and Pseudoclavibacter albus comb. nov., and revised classification of the genus Pseudoclavibacter : proposal of Caespitibacter gen. nov., with Caespitibacter soli comb. nov. and Caespitibacter caeni comb. nov
(2022) ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY. 115(4). p.461-472 -
Dominance of honey bees is negatively associated with wild bee diversity in commercial apple orchards regardless of management practices
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Co-cultivation enhanced microbial protein production based on autotrophic nitrogen-fixing hydrogen-oxidizing bacteria
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Outbreak of Burkholderia contaminans endophthalmitis traced to a clinic ventilation system
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- Journal Article
- A1
- open access
Out with the old and in with the new : time to rethink twentieth century chemotaxonomic practices in bacterial taxonomy
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Aliarcobacter, Halarcobacter, Malaciobacter, Pseudarcobacter and Poseidonibacter are later synonyms of Arcobacter : transfer of Poseidonibacter parvus, Poseidonibacter antarcticus, ‘Halarcobacter arenosus’, and ‘Aliarcobacter vitoriensis’ to Arcobacter as Arcobacter parvus comb. nov., Arcobacter antarcticus comb. nov., Arcobacter arenosus comb. nov. and Arcobacter vitoriensis comb. nov.
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- Journal Article
- A1
- open access
Biosynthesis of ditropolonyl sulfide, an antibacterial compound produced by Burkholderia cepacia complex strain R-12632
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- Journal Article
- A1
- open access
Matrix-assisted laser desorption ionization–time of flight mass spectrometry for rapid detection of isolates belonging to the epidemic clones Achromobacter xylosoxidans ST137 and Achromobacter ruhlandii DES from cystic fibrosis patients
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- Journal Article
- A1
- open access
Cutibacterium modestum and 'Propionibacterium humerusii' represent the same species that is commonly misidentified as Cutibacterium acnes
(2021) ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY. 114(8). p.1315-1320 -
Paenibacillus foliorum sp. nov., Paenibacillus phytohabitans sp. nov., Paenibacillus plantarum sp. nov., Paenibacillus planticolens sp. nov., Paenibacillus phytorum sp. nov. and Paenibacillus germinis sp. nov., isolated from the Arabidopsis thaliana phyllosphere
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MALDI-TOF MS insight into the biodiversity of Staka, the artisanal Cretan soured cream
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- Journal Article
- A1
- open access
Bacterial species identification using MALDI-TOF mass spectrometry and machine learning techniques : a large-scale benchmarking study
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- Journal Article
- A1
- open access
The holobiont as a key to the adaptation and conservation of wild bees in the Anthropocene
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Gulosibacter hominis sp. nov. : a novel human microbiome bacterium that may cause opportunistic infections
(2021) ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY. 114(11). p.1841-1854 -
Burkholderia perseverans sp. nov., a bacterium isolated from the Restinga ecosystem, is a producer of volatile and diffusible compounds that inhibit plant pathogens
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- Journal Article
- A1
- open access
Paraburkholderia dioscoreae sp. nov. : a novel plant associated growth promotor
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- Journal Article
- A2
- open access
Clinical course, treatment and visual outcome of an outbreak of Burkholderia contaminans endophthalmitis following cataract surgery
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Identification and characterization of acid-tolerant spore-forming spoilage bacteria from acidified and low-acid pasteurized sauces
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- Journal Article
- A1
- open access
The ever-expanding Pseudomonas genus : description of 43 new species and partition of the Pseudomonas putida group
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- Journal Article
- A1
- open access
Genomic aromatic compound degradation potential of novel Paraburkholderia species : Paraburkholderia domus sp. nov., Paraburkholderia haematera sp. nov. and Paraburkholderia nemoris sp. nov.
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Impact of intraspecific variation on measurements of thermal tolerance in bumble bees
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- Journal Article
- A1
- open access
Bumblebee resilience to climate change, through plastic and adaptive responses
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Characterization of novel Gluconobacter species from fruits and fermented food products : Gluconobacter cadivus sp. nov., Gluconobacter vitians sp. nov. and Gluconobacter potus sp. nov
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- Journal Article
- A1
- open access
Genomics of an endemic cystic fibrosis Burkholderia multivorans strain reveals low within-patient evolution but high between-patient diversity
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Pedobacter gandavensis sp. nov., Pedobacter foliorum sp. nov. and Pedobacter planticolens sp. nov., isolated from leaves of Arabidopsis thaliana
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Induction of antibiotic specialized metabolism by co-culturing in a collection of phyllosphere bacteria
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Entomobacter blattae gen. nov., sp. nov., a new member of the Acetobacteraceae isolated from the gut of the cockroach Gromphadorhina portentosa
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- Journal Article
- A1
- open access
Network analysis based on unique spectral features enables an efficient selection of genomically diverse operational isolation units
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- Journal Article
- A1
- open access
Presence of the weakly pathogenic Fusarium poae in the Fusarium head blight disease complex hampers biocontrol and chemical control of the virulent Fusarium graminearum pathogen
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- Journal Article
- A1
- open access
The type and concentration of inoculum and substrate as well as the presence of oxygen impact the water kefir fermentation process
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The bacterial diversity of raw Moroccon camel milk
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- Journal Article
- A1
- open access
Burkholderia bacteria produce multiple potentially novel molecules that inhibit carbapenem-resistant gram-negative bacterial pathogens
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Gluconacetobacter dulcium sp. nov., a novel Gluconacetobacter species from sugar-rich environments
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- Journal Article
- A2
- open access
Diagnostic approach for detection and identification of emerging enteric pathogens revisited : the (Ali)arcobacter lanthieri case
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Development of a database for the rapid and accurate routine identification of Achromobacter species by matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOF MS)
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- Journal Article
- A1
- open access
Optimization of culture conditions for gamma-aminobutyric acid production by newly identified Pediococcus pentosaceus MN12 isolated from 'mam nem', a fermented fish sauce
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- Journal Article
- A1
- open access
gcType : a high-quality type strain genome database for microbial phylogenetic and functional research
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- Journal Article
- A1
- open access
Decoding the capability of Lactobacillus plantarum W1 isolated from soybean whey in producing an exopolysaccharide
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A critical rebuttal of the proposed division of the genus Arcobacter into six genera using comparative genomic, phylogenetic, and phenotypic criteria
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- Journal Article
- A1
- open access
Description of Komagataeibacter melaceti sp. nov. and Komagataeibacter melomenusus sp. nov. isolated from apple cider vinegar
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- Journal Article
- A1
- open access
Roadmap for naming uncultivated archaea and bacteria
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- Journal Article
- A1
- open access
Comparative microbiomics of tephritid frugivorous pests (Diptera : Tephritidae) from the field : a tale of high variability across and within species
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An emended description of Arcobacter anaerophilus Sasi Jyothsna et al. 2013 : genomic and phenotypic insights
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Novel acetic acid bacteria from cider fermentations : acetobacter conturbans sp. nov. and acetobacter fallax sp. nov
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Nocardiopsis dassonvillei subsp. crassaminis subsp. nov., isolated from freshwater sediment, and reappraisal of Nocardiopsis alborubida Grund and Kroppenstedt 1990 emend. Nouioui et al. 2018
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Micromonospora fluminis sp. nov., isolated from mountain river sediment
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Microbial enrichment, functional characterization and isolation from a cold seep yield piezotolerant obligate hydrocarbon degraders
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- Miscellaneous
- open access
Genome sequence-based curation of PubMLST data challenges interspecies recombination in the Burkholderia cepacia complex
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- Journal Article
- A1
- open access
Burkholderia cepacia complex taxon K : where to split?
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MALDI-TOF MS profiling of non-starter lactic acid bacteria from artisanal cheeses of the Greek island of Naxos
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A taxonomic note on the genus Lactobacillus : description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae
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- Journal Article
- A1
- open access
Pectobacterium parvum sp. nov., having a Salmonella SPI-1-like Type III secretion system and low virulence
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- Journal Article
- A1
- open access
PaSiT : a novel approach based on short-oligonucleotide frequencies for efficient bacterial identification and typing
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Achromobacter veterisilvae sp. nov., from a mixed hydrogen-oxidizing bacteria enrichment reactor for microbial protein production
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A method for comprehensive proteomic analysis of human faecal samples to investigate gut dysbiosis in patients with cystic fibrosis
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- Journal Article
- A1
- open access
The buffer capacity and calcium concentration of water influence the microbial species diversity, grain growth, and metabolite production during water kefir fermentation
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- Journal Article
- A1
- open access
Impact of sample preservation and manipulation on insect gut microbiome profiling : a test case with fruit flies (Diptera, Tephritidae)
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Tracking the sources of psychrotrophic bacteria contaminating chicken cuts during processing