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Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements
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Computational approaches to identify promoters and cis-regulatory elements in plant genomes
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The PlantCARE database and tools for in silico search of plant cis-acting regulatory elements
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- Conference Paper
- C1
- open access
Integrating quality-based clustering of microarray data with Gibbs sampling for the discovery of regulatory motifs
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Effect of auxin, cytokinin, and sucrose on cell cycle gene expression in Arabidopsis thaliana cell suspension cultures
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- Journal Article
- A1
- open access
A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes
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INCLUSive: INtegrated Clustering, Upstream of sequence retrieval and motif Sampling
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- Journal Article
- A1
- open access
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
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A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
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In silico search of plant cis-acting regulatory elements