Academic Bibliography

Search 200 years of publications by Ghent University researchers.

Franco Alexander Poma Soto

Faculty of Medicine and Health Sciences > Department of Biomolecular Medicine

ORCID iD: 0000-0001-9885-4431

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- PhD Thesis
Development of a novel in situ capture spatial transcriptomics platform: design and implementation of a bioinformatics framework

Franco Alexander Poma Soto (UGent)

(2026)
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- Journal Article
- A1
- open access
Benchmarking DNA barcode decoding strategies under high error rates

Franco Alexander Poma Soto (UGent) , Hanne Van Droogenbroeck (UGent) , Brecht Soulliaert (UGent) , Maya Giridhar, Jürgen Behr, Hamed Sabzalipoor, Mark Somoza, Pieter Mestdagh (UGent) and Jo Vandesompele (UGent)

(2026) BMC BIOINFORMATICS. 27(1).
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- Research Data
Benchmarking DNA Barcode Decoding Strategies Under High Error Rates

Franco Alexander Poma Soto (UGent) , Jo Vandesompele (UGent) , Hanne Van Droogenbroeck (UGent) , Brecht Soulliaert (UGent) and Pieter Mestdagh (UGent)

(2026)
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- Journal Article
- A1
- open access
Plasma cell‐free transcriptome profiling in blood plasma from chronic liver disease patients

Franco Alexander Poma Soto (UGent) , Jasper Anckaert (UGent) , Francisco Avila Cobos (UGent) , Justine Nuytens (UGent) , Hanne Van Droogenbroeck (UGent) , Kimberly Verniers (UGent) , Marieke Vromman (UGent) , Sarah M. Briké, Nico Callewaert (UGent) , David Cassiman, et al.

(2026) SCIENTIFIC DATA. 13(1).
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- Research Data
GCP Challenges in Hepatology

Franco Alexander Poma Soto (UGent) , Anneleen Decock (UGent) and Jo Vandesompele (UGent)

(2026)
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- Journal Article
- A2
- open access
PeakPrime : a peak-guided primer design pipeline for target enrichment in 3′-end RNA-seq

Franco Alexander Poma Soto (UGent) , Brecht Soulliaert (UGent) , Hanne Van Droogenbroeck (UGent) , Pieter Mestdagh (UGent) and Jo Vandesompele (UGent)

(2026) BIOINFORMATICS ADVANCES. 6(1).
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- Research Data
PeakPrime manuscript data

Franco Alexander Poma Soto (UGent) , Brecht Souillaert, Hanne Van Droogenbroeck (UGent) , Pieter Mestdagh (UGent) and Jo Vandesompele (UGent)

(2025)
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The development of a custom spatial transcriptomics platform to study cellular heterogeneity induced by targeted therapies in neuroblastoma

Hanne Van Droogenbroeck (UGent) , Franco Alexander Poma Soto (UGent) , Brecht Soulliaert (UGent) , Mark Somoza, Maya Gridhar, Charlotte Scott (UGent) , Robrecht Raedt (UGent) , Niels Vandamme (UGent) , Bram De Wilde (UGent) , Tom Van Maerken (UGent) , et al.

(2025) OncoPoint Symposium, 11th, Abstracts.
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The development of a custom spatial transcriptomics platform to study cellular heterogeneity induced by targeted therapies in neuroblastoma

Hanne Van Droogenbroeck (UGent) , Franco Alexander Poma Soto (UGent) , Brecht Soulliaert (UGent) , Mark Somoza, Maya Gridhar, Charlotte Scott (UGent) , Robrecht Raedt (UGent) , Bram De Wilde (UGent) , Tom Van Maerken (UGent) , Pieter Mestdagh (UGent) , et al.

(2025) Advances in Neuroblastoma Research (ANR) Meeting 2025, Abstracts.
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- Journal Article
- A1
- open access
Blood collection tube and RNA purification method recommendations for extracellular RNA transcriptome profiling

The exRNAQC Consortium, Jasper Anckaert (UGent) , Francisco Avila Cobos (UGent) , Anneleen Decock (UGent) , Philippe Decruyenaere (UGent) , Jill Deleu (UGent) , Katleen De Preter (UGent) , Olivier De Wever (UGent) , Jilke De Wilde (UGent) , Bert Dhondt, et al.

(2025) NATURE COMMUNICATIONS. 16(1).

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