Academic Bibliography

Search 200 years of publications by Ghent University researchers.

dr. ir. Brecht De Paepe

Faculty of Bioscience Engineering > Department of Biotechnology

ORCID iD: 0000-0003-2858-3749

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- Journal Article
- open access
An Experimentally Verified Mechanistic Model for Predicting Quorum Sensing‐Based Switches

Jasmine De Baets (UGent) , Marjan De Mey (UGent) and Brecht De Paepe (UGent)

(2026) MICROBIAL BIOTECHNOLOGY. 19(7).
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Computational prediction of protein-protein interactions to engineer microbial chitooligosaccharide cell factories

Hamza Malik (UGent) , Wouter Demeester (UGent) , Brecht De Paepe (UGent) , Chiara Guidi (UGent) and Marjan De Mey (UGent)

(2026) AI, Engineering Biology and Beyond, Abstracts.
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- Journal Article
- A1
- open access
A scaffoldomics platform for modular in vivo enzyme colocalisation and its application to naringenin biosynthesis

Marte Elias (UGent) , Brecht De Paepe (UGent) , Julie Vanderstraeten (UGent) , Babette Lamote (UGent) , Marjan De Mey (UGent) and Yves Briers (UGent)

(2026) MICROBIAL BIOTECHNOLOGY. 19(3).
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- Conference Paper
- C3
From natural modularity to full programmability : AI-shaped design principles for customizable transcription factor biosensors

Brecht De Paepe (UGent) , Wouter Demeester (UGent) , Jasmine De Baets (UGent) and Marjan De Mey (UGent)

(2026) AIEBaB 2026, Abstracts.
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- Journal Article
- A1
- open access
Expanding the quorum sensing toolbox : promoter libraries and hybrid promoter for dynamic genetic circuits

Jasmine De Baets (UGent) , Iréne Parmentier (UGent) , Brecht De Paepe (UGent) and Marjan De Mey (UGent)

(2025) NEW BIOTECHNOLOGY. 90. p.97-113
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- Journal Article
- A1
- open access
Characterization and orthogonality assessment of two quorum sensing systems for synthetic biology applications

Jasmine De Baets (UGent) , Brecht De Paepe (UGent) and Marjan De Mey (UGent)

(2025) NEW BIOTECHNOLOGY. 90. p.20-35
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- Journal Article
- A1
- open access
Unravelling the regulatory network behind chitin degradation in Serratia marcescens

Wouter Demeester (UGent) , Brecht De Paepe (UGent) , Chiara Guidi (UGent) and Marjan De Mey (UGent)

(2025) BIOLOGICAL REVIEWS. 100(4). p.1698-1715
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- Journal Article
- A1
- open access
Biological switches : past and future milestones of transcription factor-based biosensors

Brecht De Paepe (UGent) and Marjan De Mey (UGent)

(2025) ACS SYNTHETIC BIOLOGY. 14(1). p.72-86
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- Conference Paper
- C3
A cross-bacterial gene expression toolbox : engineering orthogonal transcription to enable predictable genetic engineering in diverse bacterial hosts

Cara Deal (UGent) , Daniel Ariza Calvo, Brecht De Paepe (UGent) , Antoni Planas, Lien De Wannemaeker (UGent) and Marjan De Mey (UGent)

(2024) 7th Applied Synthetic Biology in Europe (ASBE7), Abstracts.
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- Conference Paper
- C3
Towards a universal, predictable and tuneable gene expression toolbox : strategies for engineering orthogonal transcription in bacteria

Cara Deal (UGent) , Daniel Ariza Calvo, Brecht De Paepe (UGent) , Antoni Planas, Lien De Wannemaeker (UGent) and Marjan De Mey (UGent)

(2024) 2024 Synthetic Biology: Engineering, Evolution & Design (SEED), Abstracts.

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