Academic Bibliography

Search 200 years of publications by Ghent University researchers.

Marieke Vromman

ORCID iD: 0000-0002-0163-0675

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- Conference Paper
- C3
FUSIONprimerXL : scalable PCR primer design for fusion transcript quantification

Annelien Morlion (UGent) , Marieke Vromman (UGent) , Eveline Vanden Eynde (UGent) , Kimberly Verniers (UGent) , Jo Vandesompele (UGent) and Anneleen Decock (UGent)

(2024) OncoPoint Symposium, 10th, Abstracts.
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Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision

Marieke Vromman (UGent) , Jasper Anckaert (UGent) , Stefania Bortoluzzi, Alessia Buratin, Chia-Ying Chen, Qinjie Chu, Trees-Juen Chuang, Roozbeh Dehghannasiri, Christoph Dieterich, Xin Dong, et al.

(2023) NATURE METHODS. 20(8). p.1159-1169
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- Miscellaneous
Circular RNA detection pipelines yield divergent sets of circular RNAs

Marieke Vromman (UGent) and Jo Vandesompele (UGent)

(2023) NATURE METHODS. 20(8). p.1135-1136
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- PhD Thesis
Chasing circles : developing a toolbox for circRNA detection and validation

Marieke Vromman (UGent)

(2023)
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- Conference Paper
- C3
Large-scale benchmarking of circular RNA detection tools

Marieke Vromman (UGent) , Jo Vandesompele (UGent) and Pieter-Jan Volders (UGent)

(2022) 27th Annual RNA Society Meeting 2022, Abstracts.
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- Journal Article
- A2
- open access
CiLiQuant : quantification of RNA junction reads based on their circular or linear transcript origin

Annelien Morlion (UGent) , Eva Hulstaert, Marieke Vromman (UGent) , Jasper Anckaert (UGent) , Celine Everaert (UGent) , Jo Vandesompele (UGent) and Pieter Mestdagh (UGent)

(2022) FRONTIERS IN BIOINFORMATICS. 2.
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- Journal Article
- A2
- open access
CIRCprimerXL : convenient and high-throughput PCR primer design for circular RNA quantification

Marieke Vromman (UGent) , Jasper Anckaert (UGent) , Jo Vandesompele (UGent) and Pieter-Jan Volders (UGent)

(2022) FRONTIERS IN BIOINFORMATICS. 2.
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- Conference Paper
- C3
- open access
Large-scale benchmarking of circular RNA detection tools

Marieke Vromman (UGent) , Jo Vandesompele (UGent) and Pieter-Jan Volders (UGent)

(2021) EMBO | EMBL Symposium 2021 : The Non-Coding Genome, Abstracts.
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- Miscellaneous
The RNA Atlas expands the catalog of human non-coding RNAs (June, 10.1038/s41587-021-00936-1, 2021)

Lucia Lorenzi, Hua-Sheng Chiu, Francisco Avila Cobos (UGent) , Stephen Gross, Pieter-Jan Volders (UGent) , Robrecht Cannoodt (UGent) , Justine Nuytens (UGent) , Katrien Vanderheyden, Jasper Anckaert (UGent) , Steve Lefever (UGent) , et al.

(2021) NATURE BIOTECHNOLOGY. 39(11). p.1467-1467
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- Journal Article
- A2
- open access
Validation of circular RNAs using RT‐qPCR after effective removal of linear RNAs by ribonuclease R

Marieke Vromman (UGent) , Nurten Yigit (UGent) , Kimberly Verniers (UGent) , Steve Lefever (UGent) , Jo Vandesompele (UGent) and Pieter-Jan Volders (UGent)

(2021) CURRENT PROTOCOLS. 1.

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