Department of Mathematics, Computer Science and Statistics

Journal Article
open access

CARGO: A cytometry analysis framework via Regularized graph optimal-transport

Abida Sanjana Shemonti, Grzegorz B. Gmyrek, Katrien Quintelier (UGent) , Sofie Van Gassen (UGent) , Yvan Saeys (UGent) , Marcella Willemsen, Joachim G. J. V. Aerts, Eva V. E. Madsen, J. Paul Robinson, Alex Pothen, et al.

(2026) PLOS COMPUTATIONAL BIOLOGY. 22(6).

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Conference Paper
P1
open access

Toward using machine learning as a shape quality metric for liver point cloud generation

Khoa Tuan Nguyen (UGent) , Gaeun Oh, Homin Park (UGent) , Francesca Tozzi (UGent) , Wouter Willaert (UGent) , Joris Vankerschaver (UGent) , Niki Rashidian (UGent) and Wesley De Neve (UGent)

(2026) MEDICAL IMAGING 2026: COMPUTER-AIDED DIAGNOSIS. In Progress in biomedical optics and imaging 13926.

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Journal Article
A1
open access

RNA-based CLEM (RCLEM) bridging RNA localisation and ultrastructural mapping in 3D

Daan Verhaege, Lore Van Acker (UGent) , Camille Wagner (UGent) , Yentl van den Berghe (UGent) , Jérémy Verbeke (UGent) , Martin Guilliams (UGent) , Anna Kremer (UGent) , Lien Van Hoecke (UGent) and Roosmarijn Vandenbroucke (UGent)

(2026) JOURNAL OF MICROSCOPY. 303(1). p.120-131

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Mapper-based fuzzy rough sets

Wannes De Maeyer (UGent) , Chris Cornelis (UGent) and Mauricio Restrepo

(2026) INTERNATIONAL JOURNAL OF APPROXIMATE REASONING. 197.

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Journal Article
A1
open access

anndataR improves interoperability between R and Python in single-cell transcriptomics

Louise Deconinck (UGent) , Luke Zappia, Robrecht Cannoodt (UGent) , Martin Morgan, Isaac Virshup, Chananchida Sang-aram (UGent) , Danila Bredikhin, Brian Schilder, Ruth Seurinck (UGent) , Yvan Saeys (UGent) , et al.

(2026) BIOINFORMATICS. 42(6).

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Journal Article
A1
open access

The Peptonizer2000 : bringing confidence to metaproteomics

Tanja Holstein (UGent) , Pieter Verschaffelt (UGent) , Tim Van Den Bossche (UGent) , Simon Van de Vyver (UGent) , Lennart Martens (UGent) , Bart Mesuere (UGent) and Thilo Muth

(2026) JOURNAL OF PROTEOME RESEARCH. 25(4). p.1831-1845

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Journal Article
A1
open access

Successful eradication of feline coronavirus in breeding catteries paves the way to prevent feline infectious peritonitis

Luna Vanden Buijs (UGent) , Jolien Van Cleemput (UGent) , Emmanuel Abatih (UGent) and Hans Nauwynck (UGent)

(2026) VIRUSES-BASEL. 18(6).

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Journal Article
A2
open access

Embedded metasymplectic spaces of type F4,4

Paulien Jansen, Jeroen Schillewaert (UGent) and Hendrik Van Maldeghem (UGent)

(2026) COMBINATORIAL THEORY. p.1-47

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Automorphisms of Lie incidence geometries with spectral gaps

Hendrik Van Maldeghem (UGent) , Yannick Neyt (UGent) and James Parkinson

(2026) ADVANCES IN GEOMETRY. p.1-26

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Automorphisms and opposition in spherical buildings of exceptional type, V : the E8 case

James Parkinson and Hendrik Van Maldeghem (UGent)

(2026) INNOVATIONS IN INCIDENCE GEOMETRY : ALGEBRAIC, TOPOLOGICAL AND COMBINATORIAL. 23. p.1-52

Academic Bibliography

Department of Mathematics, Computer Science and Statistics

CARGO: A cytometry analysis framework via Regularized graph optimal-transport

Toward using machine learning as a shape quality metric for liver point cloud generation

RNA-based CLEM (RCLEM) bridging RNA localisation and ultrastructural mapping in 3D

Mapper-based fuzzy rough sets

anndataR improves interoperability between R and Python in single-cell transcriptomics

The Peptonizer2000 : bringing confidence to metaproteomics

Successful eradication of feline coronavirus in breeding catteries paves the way to prevent feline infectious peritonitis

Embedded metasymplectic spaces of type F4,4

Automorphisms of Lie incidence geometries with spectral gaps

Automorphisms and opposition in spherical buildings of exceptional type, V : the E8 case

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